private void Neo_Load(object sender, EventArgs e)
{
MS1Tolerance.Text = "5";
MS2Tolerance.Text = "0.01";
MassCalculator.importMasses();
// To report progress from the background worker we need to set this property
backgroundWorker1.WorkerReportsProgress = true;
// This event will be raised on the worker thread when the worker starts
backgroundWorker1.DoWork += new DoWorkEventHandler(Engine);
// This event will be raised when we call ReportProgress
backgroundWorker1.ProgressChanged += new ProgressChangedEventHandler(backgroundWorker1_ProgressChanged);
}
protected override void DoRealGo()
{
MassCalculator averageCalc = new MassCalculator(Atom.AverageMassFunction);
MassCalculator monoCalc = new MassCalculator(Atom.MonoMassFunction);
Aminoacids aas = new Aminoacids();
aas['C'].ResetMass(aas['C'].MonoMass + 57.0215, aas['C'].AverageMass + 57.0215);
StringBuilder sb = new StringBuilder();
double totalMass = 0.0;
if (peptideSequence.Text.Length > 0)
{
double averageMass = aas.AveragePeptideMass(peptideSequence.Text);
sb.Append(MyConvert.Format("PeptideMass={0:0.0000}; ", averageMass));
totalMass = averageMass;
}
if (glycanStructure.Text.Length > 0)
{
AtomComposition ac = new AtomComposition(glycanStructure.Text);
double averageMass = averageCalc.GetMass(ac);
sb.Append(MyConvert.Format("GlycanMass={0:0.0000}; ", averageMass));
if (totalMass > 0)
{
totalMass += averageMass - 18.0;
sb.Append(MyConvert.Format("TotalMass={0:0.0000}; ", totalMass));
for (int charge = 2; charge <= 4; charge++)
{
sb.Append(MyConvert.Format("Charge{0}={1:0.0000}; ", charge, (totalMass + charge) / charge));
}
}
}
txtResultInfo.Text = sb.ToString();
}
private static void MassConverter()
{
ICalculator calculator = new MassCalculator();
Console.WriteLine("What mass unit do you want to convert from?");
Console.WriteLine("Options: 1 for Milligrams, 2 for Grams, 3 for Kilograms, 4 for Ounces, 5 for Pounds, 6 for Stones");
Console.WriteLine("Type 'exit' to stop the program.");
var convertFrom = Console.ReadLine();
while (!int.TryParse(convertFrom, out int number) || (Convert.ToInt32(convertFrom) < 1 || Convert.ToInt32(convertFrom) > 6))
{
Console.WriteLine("Error write only numbers and it must be between 1 and 6");
Console.WriteLine("Type 'exit' to stop the program.");
convertFrom = Console.ReadLine();
if (convertFrom.ToLower() == "exit")
{
break;
}
}
Console.WriteLine("What mass unit do you want to convert to?");
Console.WriteLine("Options: 1 for Milligrams, 2 for Grams, 3 for Kilograms, 4 for Ounces, 5 for Pounds, 6 for Stones");
Console.WriteLine("Type 'exit' to stop the program.");
var convertTo = Console.ReadLine();
while (!int.TryParse(convertTo, out int number) || (Convert.ToInt32(convertTo) < 1 || Convert.ToInt32(convertTo) > 6))
{
Console.WriteLine("Error write only numbers and it must be between 1 and 6");
Console.WriteLine("Type 'exit' to stop the program.");
convertTo = Console.ReadLine();
if (convertTo.ToLower() == "exit")
{
break;
}
}
Console.WriteLine("What is the value you want to convert?");
var valueToConvert = Console.ReadLine();
while (!double.TryParse(valueToConvert, out double number))
{
Console.WriteLine("Error write only numbers.");
Console.WriteLine("Type 'exit' to stop the program.");
valueToConvert = Console.ReadLine();
if (valueToConvert.ToLower() == "exit")
{
break;
}
}
IUnit from = null;
IUnit to = null;
double valueInDoubleToConvert = double.Parse(valueToConvert);
switch (convertFrom)
{
case "1":
from = new Milligram {
Value = valueInDoubleToConvert
};
break;
case "2":
from = new Gram {
Value = valueInDoubleToConvert
};
break;
case "3":
from = new Kilogram {
Value = valueInDoubleToConvert
};
break;
case "4":
from = new Ounce {
Value = valueInDoubleToConvert
};
break;
case "5":
from = new Pound {
Value = valueInDoubleToConvert
};
break;
case "6":
from = new Stone {
Value = valueInDoubleToConvert
};
break;
}
switch (convertTo)
{
case "1":
to = new Milligram();
break;
case "2":
to = new Gram();
break;
case "3":
to = new Kilogram();
break;
case "4":
to = new Ounce();
break;
case "5":
to = new Pound();
break;
case "6":
to = new Stone();
break;
}
var result = calculator.Calculate(from, to);
Console.WriteLine($"Well, {from.Value} {from.Name}(s) is equal to {result} {to.Name}(s).");
}
