private List <BaseImageLevelUpdateCommand> BuildUpdateCommandList()
{
List <BaseImageLevelUpdateCommand> updateCommandList = new List <BaseImageLevelUpdateCommand>();
ImageUpdateCommandBuilder builder = new ImageUpdateCommandBuilder();
updateCommandList.AddRange(builder.BuildCommands <StudyMatchingMap>(_destinationStudyStorage));
return(updateCommandList);
}
private void UpdateStudyOrDuplicates()
{
// StorageLocation object must be reloaded if we are overwriting the study
// with info in the duplicates.
bool needReload = false;
switch (_processDuplicateEntry.QueueData.Action)
{
case ProcessDuplicateAction.OverwriteUseDuplicates:
if (_processDuplicateEntry.QueueData.State.ExistingStudyUpdated)
{
Platform.Log(LogLevel.Info, "Existing Study has been updated before");
}
else
{
Platform.Log(LogLevel.Info, "Update Existing Study w/ Duplicate Info");
_studyUpdateCommands = BuildUpdateStudyCommandsFromDuplicate();
using (ServerCommandProcessor processor = new ServerCommandProcessor("Update Existing Study w/ Duplicate Info"))
{
processor.AddCommand(new UpdateStudyCommand(ServerPartition, StorageLocation, _studyUpdateCommands, ServerRuleApplyTimeEnum.SopProcessed, WorkQueueItem));
if (!processor.Execute())
{
throw new ApplicationException(processor.FailureReason, processor.FailureException);
}
needReload = true;
_processDuplicateEntry.QueueData.State.ExistingStudyUpdated = true;
}
}
break;
case ProcessDuplicateAction.OverwriteUseExisting:
ImageUpdateCommandBuilder commandBuilder = new ImageUpdateCommandBuilder();
_duplicateUpdateCommands = new List <BaseImageLevelUpdateCommand>();
_duplicateUpdateCommands.AddRange(commandBuilder.BuildCommands <StudyMatchingMap>(StorageLocation));
PrintCommands(_duplicateUpdateCommands);
break;
}
if (needReload)
{
StudyStorageLocation updatedStorageLocation;
//NOTE: Make sure we are loading the storage location fro the database instead of the cache.
if (!FilesystemMonitor.Instance.GetWritableStudyStorageLocation(WorkQueueItem.StudyStorageKey, out updatedStorageLocation))
{
// this is odd.. we just updated it and now it's no longer writable?
throw new ApplicationException("Filesystem is not writable");
}
StorageLocation = updatedStorageLocation;
}
}
/// <summary>
/// Gets the commands to update the study
/// </summary>
/// <returns></returns>
private List <BaseImageLevelUpdateCommand> BuildUpdateStudyCommandsFromDuplicate()
{
List <BaseImageLevelUpdateCommand> commands = new List <BaseImageLevelUpdateCommand>();
if (WorkQueueUidList.Count > 0)
{
WorkQueueUid uid = WorkQueueUidList[0];
DicomFile file = LoadDuplicateDicomFile(uid, true);
ImageUpdateCommandBuilder commandBuilder = new ImageUpdateCommandBuilder();
// Create a list of commands to update the existing study based on what's defined in StudyMatchingMap
// The value will be taken from the content of the duplicate image.
commands.AddRange(commandBuilder.BuildCommands <StudyMatchingMap>(file.DataSet,
new[] {
new ServerEntityAttributeProvider(StorageLocation.Study),
new ServerEntityAttributeProvider(StorageLocation.Patient)
}));
}
return(commands);
}
private List<BaseImageLevelUpdateCommand> BuildUpdateCommandList()
{
List<BaseImageLevelUpdateCommand> updateCommandList = new List<BaseImageLevelUpdateCommand>();
ImageUpdateCommandBuilder builder = new ImageUpdateCommandBuilder();
updateCommandList.AddRange(builder.BuildCommands<StudyMatchingMap>(_destinationStudyStorage));
return updateCommandList;
}
/// <summary>
/// Gets the commands to update the study
/// </summary>
/// <returns></returns>
private List<BaseImageLevelUpdateCommand> BuildUpdateStudyCommandsFromDuplicate()
{
List<BaseImageLevelUpdateCommand> commands = new List<BaseImageLevelUpdateCommand>();
if (WorkQueueUidList.Count>0)
{
WorkQueueUid uid = WorkQueueUidList[0];
DicomFile file = LoadDuplicateDicomFile(uid, true);
ImageUpdateCommandBuilder commandBuilder = new ImageUpdateCommandBuilder();
// Create a list of commands to update the existing study based on what's defined in StudyMatchingMap
// The value will be taken from the content of the duplicate image.
commands.AddRange(commandBuilder.BuildCommands<StudyMatchingMap>(file.DataSet,
new[]{
new ServerEntityAttributeProvider(StorageLocation.Study),
new ServerEntityAttributeProvider(StorageLocation.Patient)
}));
}
return commands;
}
private void UpdateStudyOrDuplicates()
{
// StorageLocation object must be reloaded if we are overwriting the study
// with info in the duplicates.
bool needReload = false;
switch (_processDuplicateEntry.QueueData.Action)
{
case ProcessDuplicateAction.OverwriteUseDuplicates:
if (_processDuplicateEntry.QueueData.State.ExistingStudyUpdated)
Platform.Log(LogLevel.Info, "Existing Study has been updated before");
else
{
Platform.Log(LogLevel.Info, "Update Existing Study w/ Duplicate Info");
_studyUpdateCommands = BuildUpdateStudyCommandsFromDuplicate();
using (ServerCommandProcessor processor = new ServerCommandProcessor("Update Existing Study w/ Duplicate Info"))
{
processor.AddCommand(new UpdateStudyCommand(ServerPartition, StorageLocation, _studyUpdateCommands, ServerRuleApplyTimeEnum.SopProcessed, WorkQueueItem));
if (!processor.Execute())
{
throw new ApplicationException(processor.FailureReason, processor.FailureException);
}
needReload = true;
_processDuplicateEntry.QueueData.State.ExistingStudyUpdated = true;
}
}
break;
case ProcessDuplicateAction.OverwriteUseExisting:
ImageUpdateCommandBuilder commandBuilder = new ImageUpdateCommandBuilder();
_duplicateUpdateCommands = new List<BaseImageLevelUpdateCommand>();
_duplicateUpdateCommands.AddRange(commandBuilder.BuildCommands<StudyMatchingMap>(StorageLocation));
PrintCommands(_duplicateUpdateCommands);
break;
}
if (needReload)
{
StudyStorageLocation updatedStorageLocation;
//NOTE: Make sure we are loading the storage location fro the database instead of the cache.
if (!FilesystemMonitor.Instance.GetWritableStudyStorageLocation(WorkQueueItem.StudyStorageKey, out updatedStorageLocation))
{
// this is odd.. we just updated it and now it's no longer writable?
throw new ApplicationException("Filesystem is not writable");
}
StorageLocation = updatedStorageLocation;
}
}
private AutoReconcilerResult MergeImage(StudyReconcileAction action, DicomFile file, StudyHistory lastHistory)
{
string originalSeriesUid = file.DataSet[DicomTags.SeriesInstanceUid].ToString();
string originalSopUid = file.DataSet[DicomTags.SopInstanceUid].ToString();
AutoReconcilerResult preProcessingResult = null;
StudyStorageLocation destStudy;
UidMapper uidMapper = null;
if (lastHistory.DestStudyStorageKey != null)
{
StudyStorage destinationStudy = StudyStorage.Load(lastHistory.DestStudyStorageKey);
//Load the destination. An exception will be thrown if any issues are encountered.
FilesystemMonitor.Instance.GetWritableStudyStorageLocation(destinationStudy.ServerPartitionKey,
destinationStudy.StudyInstanceUid,
StudyRestore.True, StudyCache.True,
out destStudy);
EnsureStudyCanBeUpdated(destStudy);
bool belongsToAnotherStudy = !destStudy.Equals(StorageLocation);
ImageUpdateCommandBuilder commandBuilder = new ImageUpdateCommandBuilder();
IList <BaseImageLevelUpdateCommand> commands = commandBuilder.BuildCommands <StudyMatchingMap>(destStudy);
if (belongsToAnotherStudy)
{
Platform.Log(LogLevel.Info, "AUTO-RECONCILE: Move SOP {0} to Study {1}, A#: {2}, Patient {3}", originalSopUid, destStudy.StudyInstanceUid, destStudy.Study.AccessionNumber, destStudy.Study.PatientsName);
// Load the Uid Map, either from cache or from disk
if (!_uidMapCache.TryGetValue(destStudy.Key, out uidMapper))
{
UidMapXml mapXml = new UidMapXml();
mapXml.Load(destStudy);
uidMapper = new UidMapper(mapXml);
_uidMapCache.Add(destStudy.Key, uidMapper);
}
try
{
commands.Add(GetUidMappingCommand(StorageLocation, destStudy, uidMapper, originalSopUid, originalSeriesUid));
}
catch (InstanceAlreadyExistsException ex)
{
Platform.Log(LogLevel.Info, "An instance already exists with the SOP Instance Uid {0}", ex.SopInstanceUid);
preProcessingResult = new AutoReconcilerResult(StudyReconcileAction.Discard)
{
DiscardImage = true
};
return(preProcessingResult);
}
}
preProcessingResult = new AutoReconcilerResult(action)
{
Changes = GetUpdateList(file, commands)
};
UpdateImage(file, commands);
// First, must update the map
if (uidMapper != null && uidMapper.Dirty)
{
UpdateUidMap(destStudy, uidMapper);
}
if (belongsToAnotherStudy)
{
SopInstanceImporterContext importContext = new SopInstanceImporterContext(_contextID, file.SourceApplicationEntityTitle, destStudy.ServerPartition);
SopInstanceImporter importer = new SopInstanceImporter(importContext);
DicomProcessingResult result = importer.Import(file);
if (!result.Successful)
{
throw new ApplicationException(result.ErrorMessage);
}
}
}
return(preProcessingResult);
}
private AutoReconcilerResult MergeImage(StudyReconcileAction action, DicomFile file, StudyHistory lastHistory)
{
string originalSeriesUid = file.DataSet[DicomTags.SeriesInstanceUid].ToString();
string originalSopUid = file.DataSet[DicomTags.SopInstanceUid].ToString();
AutoReconcilerResult preProcessingResult = null;
StudyStorageLocation destStudy;
UidMapper uidMapper = null;
if (lastHistory.DestStudyStorageKey != null)
{
StudyStorage destinationStudy = StudyStorage.Load(lastHistory.DestStudyStorageKey);
//Load the destination. An exception will be thrown if any issues are encountered.
FilesystemMonitor.Instance.GetWritableStudyStorageLocation(destinationStudy.ServerPartitionKey,
destinationStudy.StudyInstanceUid,
StudyRestore.True, StudyCache.True,
out destStudy);
EnsureStudyCanBeUpdated(destStudy);
bool belongsToAnotherStudy = !destStudy.Equals(StorageLocation);
ImageUpdateCommandBuilder commandBuilder = new ImageUpdateCommandBuilder();
IList<BaseImageLevelUpdateCommand> commands = commandBuilder.BuildCommands<StudyMatchingMap>(destStudy);
if (belongsToAnotherStudy)
{
Platform.Log(LogLevel.Info, "AUTO-RECONCILE: Move SOP {0} to Study {1}, A#: {2}, Patient {3}", originalSopUid, destStudy.StudyInstanceUid, destStudy.Study.AccessionNumber, destStudy.Study.PatientsName);
// Load the Uid Map, either from cache or from disk
if (!_uidMapCache.TryGetValue(destStudy.Key, out uidMapper))
{
UidMapXml mapXml = new UidMapXml();
mapXml.Load(destStudy);
uidMapper = new UidMapper(mapXml);
_uidMapCache.Add(destStudy.Key, uidMapper);
}
try
{
commands.Add(GetUidMappingCommand(StorageLocation, destStudy, uidMapper, originalSopUid, originalSeriesUid));
}
catch (InstanceAlreadyExistsException ex)
{
Platform.Log(LogLevel.Info, "An instance already exists with the SOP Instance Uid {0}", ex.SopInstanceUid);
preProcessingResult = new AutoReconcilerResult(StudyReconcileAction.Discard) { DiscardImage = true };
return preProcessingResult;
}
}
preProcessingResult = new AutoReconcilerResult(action) { Changes = GetUpdateList(file, commands) };
UpdateImage(file, commands);
// First, must update the map
if (uidMapper != null && uidMapper.Dirty)
{
UpdateUidMap(destStudy, uidMapper);
}
if (belongsToAnotherStudy)
{
SopInstanceImporterContext importContext = new SopInstanceImporterContext(_contextID, file.SourceApplicationEntityTitle, destStudy.ServerPartition);
SopInstanceImporter importer = new SopInstanceImporter(importContext);
DicomProcessingResult result = importer.Import(file);
if (!result.Successful)
{
throw new ApplicationException(result.ErrorMessage);
}
}
}
return preProcessingResult;
}