public static void Main() {
modshogun.init_shogun_with_defaults();
String[] strings = new String[] {"AAAAAAAAAACCCCCCCCCCGGGGGGGGGGTTTTTTTTTT"};
StringCharFeatures f = new StringCharFeatures(strings, EAlphabet.DNA);
f.obtain_by_sliding_window(5,1);
DynamicIntArray positions = new DynamicIntArray();
positions.append_element(0);
positions.append_element(6);
positions.append_element(16);
positions.append_element(25);
//f.obtain_by_position_list(8,positions);
}
internal static ArrayList run(string[] strs)
{
modshogun.init_shogun_with_defaults();
StringCharFeatures f = new StringCharFeatures(strs, DNA);
f.obtain_by_sliding_window(5,1);
f.set_features(strs);
DynamicIntArray positions = new DynamicIntArray();
positions.append_element(0);
positions.append_element(6);
positions.append_element(16);
positions.append_element(25);
//f.obtain_by_position_list(8,positions);
ArrayList result = new ArrayList();
result.Add(f);
modshogun.exit_shogun();
return result;
}