private static Tuple <Model, IModelReader> CreateModel3(double C1, double C2, IDynamicMaterial commonDynamicMaterialProperties, double b, double[] l, double lambdag)
{
double poissonV = 0.2;
double muLame = 2 * C1;
double bulkModulus = 2 * muLame * (1 + poissonV) / (3 * (1 - 2 * poissonV));
string filename = Path.Combine(Directory.GetCurrentDirectory(), "InputFiles", "TumorGrowthModel", "9hexa.mphtxt");
var modelReader = new ComsolMeshReader1(filename, C1, C2, 1, commonDynamicMaterialProperties, lambdag);
Model model = modelReader.CreateModelFromFile();
//Boundary Conditions
var lx = l[0];
var ly = l[1];
var lz = l[2];
var distributedLoad = new DistributedLoad(lx, ly, lz);
//var flux2 = new FluxLoad(f2);
//var dir1 = new DirichletDistribution(list => {
// return Vector.CreateWithValue(list.Count, b1);
//});
//var dir2 = new DirichletDistribution(list => {
// return Vector.CreateWithValue(list.Count, b2);
//});
//var weakDirichlet1 = new WeakDirichlet(dir1, k);
//var weakDirichlet2 = new WeakDirichlet(dir2, k);
//var dirichletFactory1 = new SurfaceLoadElementFactory(weakDirichlet1);
//var dirichletFactory2 = new SurfaceLoadElementFactory(weakDirichlet2);
var distributedLoadFactory = new SurfaceLoadElementFactory(distributedLoad);
//var fluxFactory2 = new SurfaceLoadElementFactory(flux2);
//var boundaryFactory3D = new SurfaceBoundaryFactory3D(0,
// new ConvectionDiffusionMaterial(k, new double[] { 0, 0, 0 }, 0));
int[] boundaryIDs = new int[] { 0, 5 };
foreach (int boundaryID in boundaryIDs)
{
foreach (IReadOnlyList <Node> nodes in modelReader.quadBoundaries[boundaryID])
{
foreach (Node node in nodes)
{
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationX
});
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationY
});
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationZ
});
}
}
}
return(new Tuple <Model, IModelReader>(model, modelReader));
}
private static Tuple <Model, IModelReader> CreateStructuralModel(double C1, double C2, IDynamicMaterial commonDynamicMaterialProperties, double b, double[] l, double lg)
{
string filename = Path.Combine(Directory.GetCurrentDirectory(), "InputFiles", "TumorGrowthModel", "9hexa.mphtxt");
double poisonRatio = .45;
double bulkModulus = 4 * C1 * (1 + poisonRatio) / 3 / (1 - 2 * poisonRatio);
var modelReader = new ComsolMeshReader1(filename, C1, C2, bulkModulus, commonDynamicMaterialProperties, lg);
Model model = modelReader.CreateModelFromFile();
//Boundary Conditions
var lx = l[0];
var ly = l[1];
var lz = l[2];
var distributedLoad = new DistributedLoad(lx, ly, lz);
var distributedLoadFactory = new SurfaceLoadElementFactory(distributedLoad);
int[] boundaryIDs = new int[] { 0 };
foreach (int boundaryID in boundaryIDs)
{
foreach (IReadOnlyList <Node> nodes in modelReader.quadBoundaries[boundaryID])
{
foreach (Node node in nodes)
{
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationX
});
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationY
//});
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationZ
//});
}
}
}
boundaryIDs = new int[] { 1 };
foreach (int boundaryID in boundaryIDs)
{
foreach (IReadOnlyList <Node> nodes in modelReader.quadBoundaries[boundaryID])
{
foreach (Node node in nodes)
{
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationX
//});
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationY
});
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationZ
//});
}
}
}
boundaryIDs = new int[] { 2 };
foreach (int boundaryID in boundaryIDs)
{
foreach (IReadOnlyList <Node> nodes in modelReader.quadBoundaries[boundaryID])
{
foreach (Node node in nodes)
{
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationX
//});
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationY
//});
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationZ
});
}
}
}
boundaryIDs = new int[] { 5 };
int QuadID = model.ElementsDictionary.Count + 1;
foreach (int boundaryID in boundaryIDs)
{
foreach (IReadOnlyList <Node> nodes in modelReader.quadBoundaries[boundaryID])
{
foreach (Node node in nodes)
{
model.Loads.Add(new Load()
{
Node = node, DOF = StructuralDof.TranslationX, Amount = +250.0
});
}
//var distributedLoadElement = distributedLoadFactory.CreateElement(CellType.Quad4, nodes);
//model.SurfaceLoads.Add(distributedLoadElement);
}
}
return(new Tuple <Model, IModelReader>(model, modelReader));
}
private static Tuple <Model, IModelReader> CreateStructuralModel(double[] C1, double[] C2, IDynamicMaterial[] commonDynamicMaterialProperties, double b, double[] l, double lambdag)
{
double[] poissonV = new double[C1.Length];
double[] muLame = new double[C1.Length];
double[] bulkModulusnew = new double[C1.Length];
for (int i = 0; i < C1.Length; i++)
{
poissonV[i] = 0.2;
muLame[i] = 2 * C1[i];
bulkModulusnew[i] = 2 * muLame[i] * (1 + poissonV[i]) / (3 * (1 - 2 * poissonV[i]));
}
string filename = Path.Combine(Directory.GetCurrentDirectory(), "InputFiles", "TumorGrowthModel", "125HexaHyperelasticCube.mphtxt");
var modelReader = new ComsolMeshReader1(filename, C1, C2, bulkModulusnew, commonDynamicMaterialProperties, new double[] { lambdag, 1 });
Model model = modelReader.CreateModelFromFile();
//Boundary Conditions
var lx = l[0];
var ly = l[1];
var lz = l[2];
var distributedLoad = new DistributedLoad(lx, ly, lz);
//var flux2 = new FluxLoad(f2);
//var dir1 = new DirichletDistribution(list => {
// return Vector.CreateWithValue(list.Count, b1);
//});
//var dir2 = new DirichletDistribution(list => {
// return Vector.CreateWithValue(list.Count, b2);
//});
//var weakDirichlet1 = new WeakDirichlet(dir1, k);
//var weakDirichlet2 = new WeakDirichlet(dir2, k);
//var dirichletFactory1 = new SurfaceLoadElementFactory(weakDirichlet1);
//var dirichletFactory2 = new SurfaceLoadElementFactory(weakDirichlet2);
var distributedLoadFactory = new SurfaceLoadElementFactory(distributedLoad);
//var fluxFactory2 = new SurfaceLoadElementFactory(flux2);
//var boundaryFactory3D = new SurfaceBoundaryFactory3D(0,
// new ConvectionDiffusionMaterial(k, new double[] { 0, 0, 0 }, 0));
int[] boundaryIDs = new int[] { 0 };
foreach (int boundaryID in boundaryIDs)
{
foreach (Node node in modelReader.nodeBoundaries[boundaryID])
{
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationX
});
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationY
//});
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationZ
//});
}
}
boundaryIDs = new int[] { 1 };
foreach (int boundaryID in boundaryIDs)
{
foreach (Node node in modelReader.nodeBoundaries[boundaryID])
{
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationX
//});
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationY
});
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationZ
//});
}
}
boundaryIDs = new int[] { 2 };
foreach (int boundaryID in boundaryIDs)
{
foreach (Node node in modelReader.nodeBoundaries[boundaryID])
{
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationX
//});
//node.Constraints.Add(new Constraint()
//{
// Amount = b,
// DOF = StructuralDof.TranslationY
//});
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationZ
});
}
}
boundaryIDs = new int[] { 3 };
int QuadID = model.ElementsDictionary.Count + 1;
//foreach (int boundaryID in boundaryIDs)
//{
// foreach (IReadOnlyList<Node> nodes in modelReader.quadBoundaries[boundaryID])
// {
// //var distributedLoadElement = distributedLoadFactory.CreateElement(CellType.Quad4, nodes);
// //model.SurfaceLoads.Add(distributedLoadElement);
// //var dirichletElement2 = dirichletFactory2.CreateElement(CellType.Quad4, nodes);
// //model.SurfaceLoads.Add(dirichletElement2);
// //var SurfaceBoundaryElement = boundaryFactory3D.CreateElement(CellType.Quad4, nodes);
// //var element = new Element();
// //element.ID = QuadID;
// //element.ElementType = SurfaceBoundaryElement;
// //model.SubdomainsDictionary[0].Elements.Add(element);
// //model.ElementsDictionary.Add(QuadID, element);
// //foreach (Node node in nodes)
// //{
// // element.AddNode(node);
// //}
// //QuadID += 1;
// foreach (Node node in nodes)
// {
// model.Loads.Add(new Load() { Node = node, DOF = StructuralDof.TranslationZ, Amount = +100.0 });
// }
// }
//}
//int[] nodeIDs = new int[] { 1, 2, 3, 4 };
int[] nodeIDs = new int[] { 0, 5, 10, 40 };
foreach (int nodeID in nodeIDs)
{
model.Loads.Add(new Load()
{
Node = model.NodesDictionary[nodeID], DOF = StructuralDof.TranslationZ, Amount = +lz
});
}
return(new Tuple <Model, IModelReader>(model, modelReader));
}
private static Tuple <Model, IModelReader> CreateStructuralModel(double C1, double C2, IDynamicMaterial commonDynamicMaterialProperties, double b, double[] l)
{
string filename = Path.Combine(Directory.GetCurrentDirectory(), "InputFiles", "TumorGrowthModel", "9hexa.mphtxt");
var modelReader = new ComsolMeshReader1(filename, C1, C2, 1, commonDynamicMaterialProperties);
Model model = modelReader.CreateModelFromFile();
//Boundary Conditions
var lx = l[0];
var ly = l[1];
var lz = l[2];
var distributedLoad = new DistributedLoad(lx, ly, lz);
//var flux2 = new FluxLoad(f2);
//var dir1 = new DirichletDistribution(list => {
// return Vector.CreateWithValue(list.Count, b1);
//});
//var dir2 = new DirichletDistribution(list => {
// return Vector.CreateWithValue(list.Count, b2);
//});
//var weakDirichlet1 = new WeakDirichlet(dir1, k);
//var weakDirichlet2 = new WeakDirichlet(dir2, k);
//var dirichletFactory1 = new SurfaceLoadElementFactory(weakDirichlet1);
//var dirichletFactory2 = new SurfaceLoadElementFactory(weakDirichlet2);
var distributedLoadFactory = new SurfaceLoadElementFactory(distributedLoad);
//var fluxFactory2 = new SurfaceLoadElementFactory(flux2);
//var boundaryFactory3D = new SurfaceBoundaryFactory3D(0,
// new ConvectionDiffusionMaterial(k, new double[] { 0, 0, 0 }, 0));
int[] boundaryIDs = new int[] { 0, };
foreach (int boundaryID in boundaryIDs)
{
foreach (IReadOnlyList <Node> nodes in modelReader.quadBoundaries[boundaryID])
{
foreach (Node node in nodes)
{
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationX
});
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationY
});
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationZ
});
}
}
}
boundaryIDs = new int[] { 5 };
int QuadID = model.ElementsDictionary.Count + 1;
foreach (int boundaryID in boundaryIDs)
{
foreach (IReadOnlyList <Node> nodes in modelReader.quadBoundaries[boundaryID])
{
var distributedLoadElement = distributedLoadFactory.CreateElement(CellType.Quad4, nodes);
model.SurfaceLoads.Add(distributedLoadElement);
//var dirichletElement2 = dirichletFactory2.CreateElement(CellType.Quad4, nodes);
//model.SurfaceLoads.Add(dirichletElement2);
//var SurfaceBoundaryElement = boundaryFactory3D.CreateElement(CellType.Quad4, nodes);
//var element = new Element();
//element.ID = QuadID;
//element.ElementType = SurfaceBoundaryElement;
//model.SubdomainsDictionary[0].Elements.Add(element);
//model.ElementsDictionary.Add(QuadID, element);
//foreach (Node node in nodes)
//{
// element.AddNode(node);
//}
//QuadID += 1;
}
}
return(new Tuple <Model, IModelReader>(model, modelReader));
}
private static Tuple <Model, IModelReader> CreateStructuralModel(double[] MuLame, double[] PoissonV, IDynamicMaterial[] commonDynamicMaterialProperties,
double b, double[] l, double[] lambdag)
{
double[] C1 = new double[MuLame.Length];
double[] C2 = new double[MuLame.Length];
double[] bulkModulus = new double[MuLame.Length];
for (int i = 0; i < MuLame.Length; i++)
{
//poissonV[i] = 0.2;
C1[i] = MuLame[i] / 2;
C2[i] = 0;
bulkModulus[i] = 2 * MuLame[i] * (1 + PoissonV[i]) / (3 * (1 - 2 * PoissonV[i]));
}
string filename = Path.Combine(Directory.GetCurrentDirectory(), "InputFiles", "TumorGrowthModel", "mesh.mphtxt");
ComsolMeshReader1 modelReader;
if (lambdag == null)
{
modelReader = new ComsolMeshReader1(filename, C1, C2, bulkModulus, commonDynamicMaterialProperties);
}
else
{
modelReader = new ComsolMeshReader1(filename, C1, C2, bulkModulus, commonDynamicMaterialProperties, lambdag);
}
Model model = modelReader.CreateModelFromFile();
//Boundary Conditions
var lx = l[0];
var ly = l[1];
var lz = l[2];
var distributedLoad = new DistributedLoad(lx, ly, lz);
int[] boundaryIDs = new int[] { 0, 3 };
foreach (int boundaryID in boundaryIDs)
{
foreach (Node node in modelReader.nodeBoundaries[boundaryID])
{
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationX
});
}
}
boundaryIDs = new int[] { 1, 4 };
foreach (int boundaryID in boundaryIDs)
{
foreach (Node node in modelReader.nodeBoundaries[boundaryID])
{
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationY
});
}
}
boundaryIDs = new int[] { 3, 7 };
foreach (int boundaryID in boundaryIDs)
{
foreach (Node node in modelReader.nodeBoundaries[boundaryID])
{
node.Constraints.Add(new Constraint()
{
Amount = b,
DOF = StructuralDof.TranslationZ
});
}
}
boundaryIDs = new int[] { 6 };
foreach (int boundaryID in boundaryIDs)
{
foreach (Node node in modelReader.nodeBoundaries[boundaryID])
{
model.Loads.Add(new Load()
{
Node = node, DOF = StructuralDof.TranslationZ, Amount = .1
});
}
}
return(new Tuple <Model, IModelReader>(model, modelReader));
}