public static AutomateObject CreateViewAutomata(BackTrackingNode node)
{
var res = new AutomateObject();
var nodes = new List <BackTrackingNode>();
node.Visit((g) => nodes.Add(g));
var trans = new List <Edge>();
node.Visit((g) =>
{
if (g.Nodes != null && g.Nodes.Any())
{
g.Nodes.ForEach(f =>
{
trans.Add(new Edge
{
source = g.Label,
target = f.Label
});
});
}
});
res.nodes = nodes
.Select(a => new Node()
{
id = a.Label,
label = a.Label,
size = 3,
level = a.Level
}).ToList();
res.edges =
trans.Select(d => new Edge()
{
id = d.source + "_" + d.target,
source = d.source,
target = d.target,
color = "#3300ff",
type = "arrow",
label = d.label //+ " " + CreateLabel(d)
})
.ToList();
return(res);
}
public static AutomateObject CreateViewAutomata(List <GeneLink> automata)
{
var res = new AutomateObject();
res.nodes =
automata.Select(a => a.From)
.Union(automata.Select(b => b.To)).Distinct()
.Select(a => new Node()
{
id = a, label = a, size = 3
}).ToList();
res.edges =
automata.Select(d => new Edge()
{
id = d.To + "_" + d.From,
source = d.From,
target = d.To,
color = d.IsOptional ? "#3300ff" : "#b60d0d",
type = d.IsOptional ? "dashed" : "arrow",
})
.ToList();
return(res);
}
public static AutomateObject ToFullViewAutomata(this GeneNode automata, Dictionary <string, GeneNode> automateBank)
{
var res = new AutomateObject();
var node = automata;
var nodes = new List <GeneNode>();
node.Visit((g) => nodes.Add(g));
var trans = new List <Edge>();
var tempViewAutomates = new AutomateObject()
{
edges = new List <Edge>(), nodes = new List <Node>()
};
node.Visit((g) =>
{
var toAdd = g.GetAllMergedExperiment()?.Where(a => a != g.GetExperimentName()) ?? Enumerable.Empty <string>();
foreach (var automteToAdd in toAdd)
{
var geneNodeToAdd = automateBank[automteToAdd];
if (geneNodeToAdd == null)
{
continue;
}
var lastNodeToMerge = g.GetAllMergedNodes().FirstOrDefault(a => a.StartsWith(automteToAdd));
var partAutomate = GetCutteddVersionOfAutomate(geneNodeToAdd, lastNodeToMerge, g.NodeName);
var toAddViewAutomate = partAutomate.ToViewAutomata();
toAddViewAutomate.edges.ForEach(e => e.color = "#FF5733");
tempViewAutomates.nodes.AddRange(toAddViewAutomate.nodes);
tempViewAutomates.edges.AddRange(toAddViewAutomate.edges);
}
if (g.Transitions != null && g.Transitions.Any())
{
g.Transitions.ForEach(f =>
{
trans.Add(new Edge
{
source = g.NodeName,
target = f.Node.NodeName,
});
});
}
});
res.nodes = nodes
.Select(a => new Node()
{
id = a.NodeName,
label = FormatNodeLabel(a),
size = 3
}).ToList();
res.edges =
trans.Select(d => new Edge()
{
id = d.source + "_" + d.target,
source = d.source,
target = d.target,
color = "#3300ff",
type = "arrow",
label = d.label //+ " " + CreateLabel(d)
})
.ToList();
res.nodes.AddRange(tempViewAutomates.nodes.Where(r => res.nodes.All(b => b.id != r.id)));
res.edges.AddRange(tempViewAutomates.edges);
return(res);
}
