public GraphDataProperties(string group, AreaCVNormalizationMethod normalizationMethod, int ratioIndex, string annotation, int minimumDetections)
{
Group = group;
NormalizationMethod = normalizationMethod;
RatioIndex = ratioIndex;
Annotation = annotation;
MinimumDetections = minimumDetections;
}
public AreaCVGraphData Get(string group, string annotation, int minimumDetections,
AreaCVNormalizationMethod normalizationMethod, int ratioIndex)
{
lock (_cacheInfo)
{
// Linear search, but very short list
return(_cacheInfo.Data.FirstOrDefault(d => d._graphSettings.Group == group &&
d._graphSettings.Annotation == annotation &&
d._graphSettings.MinimumDetections == minimumDetections &&
d._graphSettings.NormalizationMethod == normalizationMethod &&
d._graphSettings.RatioIndex == ratioIndex));
}
}
public AreaCVRefinementSettings(double cvCutoff, double qValueCutoff, int minimumDetections, AreaCVNormalizationMethod normalizationMethod, int ratioIndex)
{
CVCutoff = cvCutoff;
QValueCutoff = qValueCutoff;
MinimumDetections = minimumDetections;
NormalizationMethod = normalizationMethod;
RatioIndex = ratioIndex;
MsLevel = AreaCVMsLevel.products; // Not MS1 for now
Transitions = AreaCVTransitions.all; // All transitions for now
Transitions = (AreaCVTransitions)3;
Annotation = null;
Group = null;
}
public AreaCVRefinementSettings(double cvCutoff, double qValueCutoff, int minimumDetections, AreaCVNormalizationMethod normalizationMethod, int ratioIndex,
AreaCVTransitions transitions, int countTransitions, AreaCVMsLevel msLevel)
{
CVCutoff = cvCutoff;
QValueCutoff = qValueCutoff;
MinimumDetections = minimumDetections;
NormalizationMethod = normalizationMethod;
RatioIndex = ratioIndex;
MsLevel = msLevel;
Transitions = transitions;
CountTransitions = countTransitions;
Annotation = null;
Group = null;
}
public AreaCVGraphSettings(GraphTypeSummary graphType, AreaCVNormalizationMethod normalizationMethod, int ratioIndex, string group, string annotation, PointsTypePeakArea pointsType, double qValueCutoff,
double cvCutoff, int minimumDetections, double binwidth)
{
GraphType = graphType;
NormalizationMethod = normalizationMethod;
RatioIndex = ratioIndex;
Group = group;
Annotation = annotation;
PointsType = pointsType;
QValueCutoff = qValueCutoff;
CVCutoff = cvCutoff;
MinimumDetections = minimumDetections;
BinWidth = binwidth;
}