private void ProcessSrmSpectrum(double time,
string modifiedSequence,
Color peptideColor,
double precursorMz,
int filterIndex,
double[] mzs,
double[] intensities,
double ionMobilityValue,
double ionMobilityExtractionWidth,
ChromDataCollectorSet chromMap)
{
float[] intensityFloats = new float[intensities.Length];
for (int i = 0; i < intensities.Length; i++)
intensityFloats[i] = (float) intensities[i];
var productFilters = mzs.Select(mz => new SpectrumProductFilter(mz, 0)).ToArray();
var spectrum = new ExtractedSpectrum(modifiedSequence, peptideColor, precursorMz, ionMobilityValue, ionMobilityExtractionWidth,
ChromExtractor.summed, filterIndex, productFilters, intensityFloats, null);
chromMap.ProcessExtractedSpectrum((float)time, _collectors, -1, spectrum, null);
}
/// <summary>
/// Process a list of spectra - typically of length one,
/// but possibly a set of drift bins all with same retention time,
/// or a set of Agilent ramped-CE Mse scans to be averaged
/// </summary>
private void ProcessSpectrumList(MsDataSpectrum[] spectra,
ChromDataCollectorSet chromMap,
double rt,
SpectrumFilter filter,
string scanId)
{
lock (_blockWriter)
{
foreach (var spectrum in filter.Extract(rt, spectra))
{
if (_loader.IsCanceled)
throw new LoadCanceledException(Status);
chromMap.ProcessExtractedSpectrum((float) rt, _collectors, GetScanIdIndex(scanId), spectrum, AddChromCollector);
}
}
}
