public void TestGetMissCleavageSiteCount()
{
Protease trypsin = new Protease("Trypsin", true, "KR", "P");
Assert.AreEqual(0, trypsin.GetMissCleavageSiteCount("EGEABDR"));
Assert.AreEqual(0, trypsin.GetMissCleavageSiteCount("EGEKPABDR"));
Assert.AreEqual(0, trypsin.GetMissCleavageSiteCount("EGERPABDR"));
Assert.AreEqual(1, trypsin.GetMissCleavageSiteCount("EGEKABDR"));
Assert.AreEqual(1, trypsin.GetMissCleavageSiteCount("EGERABDR"));
Assert.AreEqual(2, trypsin.GetMissCleavageSiteCount("EGEKARBDR"));
Protease noenzyme = new Protease("Noenzyme", true, "", "");
Assert.AreEqual(0, noenzyme.GetMissCleavageSiteCount("EGEABDR"));
}