public void Select(SrmTransition trans)
{
var intensities = (from s in trans.Intensities
where s.Intensity > 0
orderby s.Intensity
select s.Intensity).ToList();
if (intensities.Count > 0)
{
int selectedCount = (int)(intensities.Count * this.lowestPercentageForBaseline);
if (selectedCount > 0)
{
trans.Noise = intensities.Take(selectedCount).Average();
var minIntensity = trans.Noise * minFactor;
trans.Intensities.ForEach(m => m.Enabled = m.Intensity >= minIntensity);
trans.KeepHighestContig();
return;
}
else
{
trans.Noise = intensities.Average();
}
}
else
{
trans.Noise = 1.0;
}
trans.Intensities.ForEach(m => m.Enabled = false);
}
public void Select(SrmTransition trans)
{
var maxIntensity = trans.Intensities.Max(m => m.Intensity);
if (maxIntensity > 0)
{
double minIntensity = maxIntensity * percentage;
trans.Intensities.ForEach(m => m.Enabled = m.Intensity >= minIntensity);
trans.KeepHighestContig();
}
else
{
trans.Intensities.ForEach(m => m.Enabled = false);
}
}