/// <summary>
/// Set marker. Add some warnings if the marker relates to incomplete transcripts
/// </summary>
/// <param name="marker"></param>
public void SetMarker(Interval marker)
{
Marker = marker;
Transcript transcript = GetTranscript();
if (transcript != null)
{
// Transcript level errors or warnings
AddErrorWarningInfo(transcript.sanityCheck(Variant));
// Exon level errors or warnings
Exon exon = GetExon();
if (exon != null)
{
AddErrorWarningInfo(exon.SanityCheck(Variant));
}
}
}
