/// <summary>
/// Constructor
/// </summary>
public ProteinDetectionObj()
{
_proteinDetectionListRef = null;
_proteinDetectionProtocolRef = null;
_proteinDetectionList = null;
_proteinDetectionProtocol = null;
InputSpectrumIdentifications = new IdentDataList <InputSpectrumIdentificationsObj>(1);
}
/// <summary>
/// Create an object using the contents of the corresponding MzIdentML object
/// </summary>
/// <param name="ad"></param>
/// <param name="idata"></param>
public AnalysisDataObj(AnalysisDataType ad, IdentDataObj idata)
: base(idata)
{
SpectrumIdentificationList = new IdentDataList <SpectrumIdentificationListObj>(1);
_proteinDetectionList = null;
if (ad.SpectrumIdentificationList?.Count > 0)
{
SpectrumIdentificationList.AddRange(ad.SpectrumIdentificationList, sil => new SpectrumIdentificationListObj(sil, IdentData));
}
if (ad.ProteinDetectionList != null)
{
_proteinDetectionList = new ProteinDetectionListObj(ad.ProteinDetectionList, IdentData);
}
}
/// <summary>
/// Create an object using the contents of the corresponding MzIdentML object
/// </summary>
/// <param name="ad"></param>
/// <param name="idata"></param>
public AnalysisDataObj(AnalysisDataType ad, IdentDataObj idata)
: base(idata)
{
_spectrumIdentificationList = null;
_proteinDetectionList = null;
if (ad.SpectrumIdentificationList != null && ad.SpectrumIdentificationList.Count > 0)
{
SpectrumIdentificationList = new IdentDataList <SpectrumIdentificationListObj>();
foreach (var sil in ad.SpectrumIdentificationList)
{
SpectrumIdentificationList.Add(new SpectrumIdentificationListObj(sil, IdentData));
}
}
if (ad.ProteinDetectionList != null)
{
_proteinDetectionList = new ProteinDetectionListObj(ad.ProteinDetectionList, IdentData);
}
}
/// <summary>
/// Constructor
/// </summary>
public AnalysisDataObj()
{
SpectrumIdentificationList = new IdentDataList <SpectrumIdentificationListObj>();
_proteinDetectionList = null;
}