public static void Main(string[] args)
{
SplashRunner app = new SplashRunner();
bool show_help = false;
string filename = string.Empty;
int spec_col = 0;
int id_col = 1;
var p = new OptionSet() {
"Usage: SplashRunner [OPTIONS]+",
"Calculates splash codes for the specified file.",
"",
"Options:",
{ "f|file=", "the {NAME} of the file containing the spectra to calculate splashes for.",
v => filename = v },
{ "s|spectrum=",
"the zero-based column number of the spectrum.\n" +
"this must be an integer. Default = 0",
(int v) => spec_col = v },
{ "i|id=",
"the zero-based column number of the origin id.\n" +
"this must be an string. Default = 1",
(int v) => id_col = v },
{ "h|help", "show this message and exit",
v => show_help = v != null },
};
List<string> extra;
try {
extra = p.Parse (args);
} catch (OptionException e) {
Console.Write ("SplashRunner: ");
Console.WriteLine (e.Message);
Console.WriteLine ("Try `SplashRunner --help' for more information.");
return;
}
if (show_help) {
p.WriteOptionDescriptions (Console.Out);
return;
}
string error = "\nPlease provide a filename (<name>.csv) with spectra to hash.\nFile should contain a list of coma separated values in the form 'identifier,spectrum' each on a separate line.\n";
if(string.IsNullOrEmpty(filename)) {
Console.WriteLine("Error: {0}\n", error);
p.WriteOptionDescriptions(Console.Out);
return;
} else if(!new FileInfo(filename).Exists) {
Console.WriteLine("File '{0}' doesn't exists.\n");
p.WriteOptionDescriptions(Console.Out);
return;
}
app.hashFile(filename, spec_col, id_col);
}
public static void Main(string[] args)
{
SplashRunner app = new SplashRunner();
bool show_help = false;
string filename = string.Empty;
int spec_col = 0;
int id_col = 1;
var p = new OptionSet()
{
"Usage: SplashRunner [OPTIONS]+",
"Calculates splash codes for the specified file.",
"",
"Options:",
{ "f|file=", "the {NAME} of the file containing the spectra to calculate splashes for.",
v => filename = v },
{ "s|spectrum=",
"the zero-based column number of the spectrum.\n" +
"this must be an integer. Default = 0",
(int v) => spec_col = v },
{ "i|id=",
"the zero-based column number of the origin id.\n" +
"this must be an string. Default = 1",
(int v) => id_col = v },
{ "h|help", "show this message and exit",
v => show_help = v != null },
};
List <string> extra;
try {
extra = p.Parse(args);
} catch (OptionException e) {
Console.Write("SplashRunner: ");
Console.WriteLine(e.Message);
Console.WriteLine("Try `SplashRunner --help' for more information.");
return;
}
if (show_help)
{
p.WriteOptionDescriptions(Console.Out);
return;
}
string error = "\nPlease provide a filename (<name>.csv) with spectra to hash.\nFile should contain a list of coma separated values in the form 'identifier,spectrum' each on a separate line.\n";
if (string.IsNullOrEmpty(filename))
{
Console.WriteLine("Error: {0}\n", error);
p.WriteOptionDescriptions(Console.Out);
return;
}
else if (!new FileInfo(filename).Exists)
{
Console.WriteLine("File '{0}' doesn't exists.\n");
p.WriteOptionDescriptions(Console.Out);
return;
}
app.hashFile(filename, spec_col, id_col);
}
