public static TwoByTwo GetInstance(Dictionary <string, int> cidToVal1, Dictionary <string, int> cidToVal2, bool rememberCases)
{
TwoByTwo twoByTwo = rememberCases ? (TwoByTwo) new TwoByTwoCases() : (TwoByTwo) new TwoByTwoCounts();
twoByTwo.Var1 = null;
twoByTwo.Var2 = null;
twoByTwo.TabulateCounts(cidToVal1, cidToVal2);
return(twoByTwo);
}
public static TwoByTwo GetInstance(string var1, string var2)
{
TwoByTwo twoByTwo = new TwoByTwo();
twoByTwo.Var1 = var1;
twoByTwo.Var2 = var2;
twoByTwo.Counts = new int[2, 2]; //C# init's to 0's
return(twoByTwo);
}
public static TwoByTwo GetInstance(KeyValuePair <string, Dictionary <string, int> > varAndCidToVal1, KeyValuePair <string, Dictionary <string, int> > varAndCidToVal2, bool rememberCases)
{
TwoByTwo twoByTwo = rememberCases ? (TwoByTwo) new TwoByTwoCases() : (TwoByTwo) new TwoByTwoCounts();
twoByTwo.Var1 = varAndCidToVal1.Key;
twoByTwo.Var2 = varAndCidToVal2.Key;
twoByTwo.TabulateCounts(varAndCidToVal1.Value, varAndCidToVal2.Value);
return(twoByTwo);
}
public static TwoByTwo GetInstance(Dictionary <string, int> cidToVal1, Dictionary <string, int> cidToVal2)
{
TwoByTwo twoByTwo = new TwoByTwo();
twoByTwo.Var1 = null;
twoByTwo.Var2 = null;
twoByTwo.TabulateCounts(cidToVal1, cidToVal2);
return(twoByTwo);
}
public static TwoByTwo GetInstance(KeyValuePair <string, Dictionary <string, int> > varAndCidToVal1, KeyValuePair <string, Dictionary <string, int> > varAndCidToVal2)
{
TwoByTwo twoByTwo = new TwoByTwo();
twoByTwo.Var1 = varAndCidToVal1.Key;
twoByTwo.Var2 = varAndCidToVal2.Key;
twoByTwo.TabulateCounts(varAndCidToVal1.Value, varAndCidToVal2.Value);
return(twoByTwo);
}
public static IEnumerable <TwoByTwo> GetCollection(bool lowMemory, bool unsorted, string inputSparseFileName1, string inputSparseFileName2, bool rememberCases)
{
if (unsorted)
{
return(TwoByTwo.GetUnsortedCollection(inputSparseFileName1, inputSparseFileName2, lowMemory, rememberCases));
}
else
{
return(TwoByTwo.GetSortedCollection(inputSparseFileName1, inputSparseFileName2, lowMemory, rememberCases));
}
}
private static IEnumerable <TwoByTwo> ProcessCore(string inputSparseFileName1, IEnumerable <KeyValuePair <string, Dictionary <string, int> > > varToCidToVal2, bool rememberCases)
{
foreach (KeyValuePair <string, Dictionary <string, int> > varAndCidToVal1 in GroupByVariableLowMemory(inputSparseFileName1))
{
foreach (KeyValuePair <string, Dictionary <string, int> > varAndCidToVal2 in varToCidToVal2)
{
TwoByTwo twoByTwo = TwoByTwo.GetInstance(varAndCidToVal1, varAndCidToVal2, rememberCases);
yield return(twoByTwo);
}
}
}
private static List <TwoByTwo> ProcessCore(string inputSparseFileName1, IEnumerable <KeyValuePair <string, Dictionary <string, int> > > varToCidToVal2)
{
List <TwoByTwo> twoByTwoCollection = new List <TwoByTwo>();
foreach (KeyValuePair <string, Dictionary <string, int> > varAndCidToVal1 in GroupByVariableLowMemory(inputSparseFileName1))
{
foreach (KeyValuePair <string, Dictionary <string, int> > varAndCidToVal2 in varToCidToVal2)
{
TwoByTwo twoByTwo = TwoByTwo.GetInstance(varAndCidToVal1, varAndCidToVal2);
twoByTwoCollection.Add(twoByTwo);
}
}
return(twoByTwoCollection);
}
public static TwoByTwo GetInstance(int[] fisherCounts)
{
SpecialFunctions.CheckCondition(fisherCounts.Length == 4);
TwoByTwo twoByTwo = new TwoByTwo();
twoByTwo.Var1 = null;
twoByTwo.Var2 = null;
twoByTwo.Counts = new int[2, 2];
twoByTwo.Counts[1, 1] = fisherCounts[(int)TwoByTwo.ParameterIndex.TT];
twoByTwo.Counts[1, 0] = fisherCounts[(int)TwoByTwo.ParameterIndex.TF];
twoByTwo.Counts[0, 1] = fisherCounts[(int)TwoByTwo.ParameterIndex.FT];
twoByTwo.Counts[0, 0] = fisherCounts[(int)TwoByTwo.ParameterIndex.FF];
return(twoByTwo);
}
