public Search(string programName, FlagLevel searchLevel, string dataFileName)
{
this.programName = programName;
this.searchLevel = searchLevel;
this.dataFileName = dataFileName;
try
{
reader = new FastaReader(dataFileName);
}
catch (Exception ex)
{
Console.WriteLine(ex.Message);
}
}
public void Search()
{
FastaReader reader = new FastaReader("16S.fasta");
List <string> idList = reader.GetIdListBySequence("ATTCTGGTTGATCCTGCCAG");
if (idList.Count() == 0)
{
Console.WriteLine("IDs not found!");
}
else
{
foreach (string id in idList)
{
Console.WriteLine(id);
}
}
}
public void Search()
{
FastaReader reader = new FastaReader("16S.fasta");
List <string> idList = reader.GetIdListByName("Streptomyces");
if (idList.Count() == 0)
{
Console.WriteLine("IDs not found!");
}
else
{
foreach (string id in idList)
{
Console.WriteLine(id);
}
Console.WriteLine("Found : {0} rows", idList.Count);
}
}