public void test_usingStandardFile() { RunFactory runfactory = new RunFactory(); UIMFRun run = (UIMFRun)runfactory.CreateRun(standardFile); UIMFRunTester tester = new UIMFRunTester(); int startScan = run.MinLCScan; int stopScan = run.MaxLCScan; int startFrame = 1; int stopFrame = 10; tester.DisplayBasicRunInfo(run); tester.GenerateMassSpectraForRanges(run, startFrame, stopFrame, startScan, stopScan); }
public void getMassSpectra() { RunFactory runfactory = new RunFactory(); UIMFRun run = (UIMFRun)runfactory.CreateRun(testFile); UIMFRunTester tester = new UIMFRunTester(); int startScan = run.MinLCScan; int stopScan = run.MaxLCScan; int startFrame = 6; int stopFrame = 6; tester.DisplayBasicRunInfo(run); tester.GenerateMassSpectraForRanges(run, startFrame, stopFrame, startScan, stopScan); // tester.DisplayFrameParameters(run, startFrame, stopFrame); }
public void isolatedProblem_Test1() { RunFactory runfactory = new RunFactory(); UIMFRun run = (UIMFRun)runfactory.CreateRun(testFile); UIMFRunTester tester = new UIMFRunTester(); int startScan = 283; int stopScan = 286; int startFrame = 6; int stopFrame = 6; tester.DisplayBasicRunInfo(run); tester.GenerateMassSpectraForRanges(run, startFrame, stopFrame, startScan, stopScan); // tester.DisplayFrameParameters(run, startFrame, stopFrame); }
public void reopenedRedmineIssue_test1() { string problemFile = @"\\proto-10\IMS_TOF_3\2010_4\okd_urine_S15_19Nov10_Cheetah_10-08-06_0000\okd_urine_S15_19Nov10_Cheetah_10-08-06_0000.UIMF"; RunFactory runfactory = new RunFactory(); UIMFRun run = (UIMFRun)runfactory.CreateRun(problemFile); UIMFRunTester tester = new UIMFRunTester(); int startScan = run.MinLCScan; int stopScan = run.MaxLCScan; int startFrame = 0; int stopFrame = 9; tester.DisplayBasicRunInfo(run); tester.GenerateMassSpectraForRanges(run, startFrame, stopFrame, startScan, stopScan); //Getting error: //1 0 FAILED. Specified argument was out of the range of valid values. // Parameter name: ERROR in SumScansNonCached: frame_index 1 is not in range; should be >= 0 and < 0 }