private void FillTree(ItemCollection itemColl, RepositoryUnit dataNode)
{
TreeViewItem tvi = new TreeViewItem();
tvi.IsExpanded = true;
itemColl.Add(tvi);
//If its a potential draggable object we put his item id into it
if (dataNode.IsLeaf)
tvi.Name = dataNode.ItemId;
tvi.Header = dataNode.Name;
foreach (RepositoryUnit childDataNode in dataNode.Children)
{
FillTree(tvi.Items, childDataNode);
}
} // end method
/// <summary>
/// silverlight library does not supports ICloneable interface hence we
/// are implementing our own deep copy api here. This method copies
/// all the references of this object and returns it.
/// </summary>
/// <returns></returns>
public RepositoryUnit Copy()
{
//we might need to chck for possible nulls here
RepositoryUnit duplicate = new RepositoryUnit()
{
Name = this.Name,
Counter = this.Counter,
IsLeaf = this.IsLeaf,
PatternId = this.PatternId,
ItemId = this.ItemId,
Parent = this.Parent
};
foreach (RepositoryUnit unit in this.Children)
duplicate.Children.Add(unit.Copy());
return duplicate;
}
public RepositoryUnit CreateChild(string name, string type, int id)
{
RepositoryUnit child = new RepositoryUnit()
{
PatternId = id,
//if is a leaf, issue a normal name to it otherwise put a counter beside it
Name = name ,
Parent = this,
//Check if we have a valid Id. If no, we know it is not a leaf
IsLeaf = id > 0 ? true : false
};
//child.Name = id > 0 ? name : name + " [" + (Counter++) + "] ";
Children.Add(child);
if (child.IsLeaf)
{
this.Name = Name + " [" + (Counter++) + "] ";
//Create a unique id for our tree view item
child.ItemId = child.PatternId + "|" + type + "|" + child.Name;
}
return child;
}
/// <summary>
/// Rebuilds the repository tree view structure
/// </summary>
/// <param name="dataNode">/test/</param>
public void ConstructTreeView(RepositoryUnit dataNode)
{
TreeOfLife.Items.Clear();
FillTree(TreeOfLife.Items, dataNode);
}
/// <summary>
/// Here we build our repository tree view collection.
/// ***More documentation needed***
/// </summary>
/// <param name="DefinitingPatterns"></param>
/// <returns></returns>
public static RepositoryUnit CreateRepositoryData(List<DefinitionPatternInfo> DefinitingPatterns)
{
//We hardcode the server name for now.
RepositoryUnit root = new RepositoryUnit() { Name = "QUT.BioPatML.Repository.server" };
#region Initialize all BioPatML possible pattern
RepositoryUnit any = root.CreateChild("Any", null, -1);
RepositoryUnit gap = root.CreateChild("Gap", null, -1);
RepositoryUnit composite = root.CreateChild("Composite", null, -1);
RepositoryUnit block = root.CreateChild("Block", null, -1);
RepositoryUnit regEx = root.CreateChild("RegularExpression", null, -1);
RepositoryUnit motif = root.CreateChild("Motif", null, -1);
RepositoryUnit prosite = root.CreateChild("Prosite", null, -1);
RepositoryUnit pwm = root.CreateChild("PWM", null, -1);
RepositoryUnit set = root.CreateChild("Set", null, -1);
RepositoryUnit series = root.CreateChild("Series", null, -1);
RepositoryUnit iteration = root.CreateChild("Iteration", null, -1);
RepositoryUnit repeat = root.CreateChild("Repeat", null, -1);
RepositoryUnit logic = root.CreateChild("Logic", null, -1);
RepositoryUnit alignment = root.CreateChild("Alignment", null, -1);
RepositoryUnit constraint = root.CreateChild("Constraint", null, -1);
RepositoryUnit Void = root.CreateChild("Void", null, -1);
#endregion
foreach (DefinitionPatternInfo defPattern in DefinitingPatterns)
{
switch (defPattern.MainPatternType)
{
#region Find and Build the appropriate "Regional Pattern"
case "Any":
{
any.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Gap" :
{
gap.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Composite":
{
composite.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
#endregion
#region Find and Build the appropriate "Recursive Pattern"
case "Block":
{
block.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "RegularExpression":
{
regEx.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Motif":
{
motif.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Prosite":
{
prosite.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "PWM":
{
pwm.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
#endregion
#region Find and Build the appropriate "Structured Pattern"
case "Set":
{
set.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Series":
{
series.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Iteration":
{
iteration.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Repeat":
{
repeat.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Logic":
{
logic.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
#endregion
#region Find and Build the appropriate "Special Pattern"
case "Alignment":
{
alignment.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Constraint":
{
constraint.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
case "Void":
{
Void.CreateChild
(defPattern.MainPatternName,
defPattern.MainPatternType,
Convert.ToInt16(defPattern.MainPatternId));
break;
}
#endregion
}
}
return root;
}
