private void btnOK_Click(object sender, EventArgs e)
{
if (this.textBox1.Text != "")
{
int num1 = Convert.ToInt32(this.txbBP.Text);
int num2 = Convert.ToInt32(this.txbLen.Text);
if (((num1 <= 0) || (num1 > 0x270f)) || (((num2 < 0) || (num2 > 0x270f)) || (num2 > num1)))
{
MessageBox.Show("Error in Start Position and Length for search.Maximum Start and Length is 9999. Try again.", "Error");
}
else
{
try
{
ArrayList list1 = new ArrayList();
ArrayList list2 = new ArrayList();
list2 = this.parseInput(this.textBox1.Text);
Thread thread1 = new Thread(new ThreadStart(this.ORFthread));
thread1.Start();
thread1.Join();
if (this.dt != null)
{
this.dt.PrimaryKey = new DataColumn[] { this.dt.Columns["Systematic Name"] };
splitTable table1 = new splitTable();
table1.TableSplit(this.dt, "Common");
DataTable table2 = table1.dtUnique;
DataTable table3 = table1.dtMultiple;
table1 = new splitTable();
table1.TableSplit(this.dt, "Genbank");
DataTable table4 = table1.dtUnique;
DataTable table5 = table1.dtMultiple;
this.sq = this.tf.Sequence.Clone();
string text1 = "";
int num3 = 0;
this.pgrBar.Maximum = list2.Count;
this.pgrBar.Value = 0;
foreach (string text2 in list2)
{
DataRow row1;
this.pgrBar.Value++;
if (this.rbnName.Checked)
{
row1 = table2.Rows.Find(text2);
if (row1 != null)
{
text1 = row1["Map"].ToString();
this.addToTable(text1, text2);
continue;
}
text1 = "";
for (int num4 = 0; num4 < table3.Rows.Count; num4++)
{
if (text2 == table3.Rows[num4]["Common"].ToString())
{
text1 = table3.Rows[num4]["Map"].ToString();
string text3 = text2 + " _ " + num3.ToString();
num3++;
this.addToTable(text1, text3);
}
}
if (text1 == "")
{
list1.Add(text2);
}
}
else if (this.rbnGB.Checked)
{
row1 = table4.Rows.Find(text2);
if (row1 != null)
{
text1 = row1["Map"].ToString();
this.addToTable(text1, text2);
continue;
}
text1 = "";
for (int num5 = 0; num5 < table5.Rows.Count; num5++)
{
if (text2 == table5.Rows[num5]["Genbank"].ToString())
{
this.addToTable(text1, text2);
}
}
if (text1 == "")
{
list1.Add(text2);
}
}
}
this.pgrBar.Value = this.pgrBar.Maximum;
if (list1.Count > 0)
{
string text4 = "";
foreach (string text5 in list1)
{
text4 = text4 + text5 + "\t";
}
StreamWriter writer1 = new StreamWriter("FactScan.log", true);
writer1.WriteLine(DateTime.Now.ToString());
writer1.WriteLine("Can not find the following {0} genes in 9999 database:\r\n\r\n" + text4, list1.Count);
writer1.WriteLine();
writer1.Close();
MessageBox.Show("Can not find the following " + list1.Count.ToString() + " genes:\r\n\r\n" + text4, "Not found items");
}
this.btnCancel.Text = "Finish";
this.btnCancel.Focus();
MessageBox.Show("Search Completed successfully!\r\n" + this.sq.Rows.Count.ToString() + " sequences added!", "Done");
}
}
catch (Exception exception1)
{
MessageBox.Show("Read 9999 Sequence Database Error: " + exception1.Message);
}
}
}
}
private void btnOK_Click(object sender, EventArgs e)
{
if (this.textBox1.Text != "")
{
int num1 = Convert.ToInt32(this.txbBP.Text);
int num2 = Convert.ToInt32(this.txbLen.Text);
if (((num1 <= 0) || (num1 > 0x270f)) || (((num2 < 0) || (num2 > 0x270f)) || (num2 > num1)))
{
MessageBox.Show("Error in Start Position and Length for search.Maximum Start and Length is 9999. Try again.", "Error");
}
else
{
try
{
ArrayList list1 = new ArrayList();
ArrayList list2 = new ArrayList();
list2 = this.parseInput(this.textBox1.Text);
Thread thread1 = new Thread(new ThreadStart(this.ORFthread));
thread1.Start();
thread1.Join();
if (this.dt != null)
{
this.dt.PrimaryKey = new DataColumn[] { this.dt.Columns["Systematic Name"] };
splitTable table1 = new splitTable();
table1.TableSplit(this.dt, "Common");
DataTable table2 = table1.dtUnique;
DataTable table3 = table1.dtMultiple;
table1 = new splitTable();
table1.TableSplit(this.dt, "Genbank");
DataTable table4 = table1.dtUnique;
DataTable table5 = table1.dtMultiple;
this.sq = this.tf.Sequence.Clone();
string text1 = "";
int num3 = 0;
this.pgrBar.Maximum = list2.Count;
this.pgrBar.Value = 0;
foreach (string text2 in list2)
{
DataRow row1;
this.pgrBar.Value++;
if (this.rbnName.Checked)
{
row1 = table2.Rows.Find(text2);
if (row1 != null)
{
text1 = row1["Map"].ToString();
this.addToTable(text1, text2);
continue;
}
text1 = "";
for (int num4 = 0; num4 < table3.Rows.Count; num4++)
{
if (text2 == table3.Rows[num4]["Common"].ToString())
{
text1 = table3.Rows[num4]["Map"].ToString();
string text3 = text2 + " _ " + num3.ToString();
num3++;
this.addToTable(text1, text3);
}
}
if (text1 == "")
{
list1.Add(text2);
}
}
else if (this.rbnGB.Checked)
{
row1 = table4.Rows.Find(text2);
if (row1 != null)
{
text1 = row1["Map"].ToString();
this.addToTable(text1, text2);
continue;
}
text1 = "";
for (int num5 = 0; num5 < table5.Rows.Count; num5++)
{
if (text2 == table5.Rows[num5]["Genbank"].ToString())
{
this.addToTable(text1, text2);
}
}
if (text1 == "")
{
list1.Add(text2);
}
}
}
this.pgrBar.Value = this.pgrBar.Maximum;
if (list1.Count > 0)
{
string text4 = "";
foreach (string text5 in list1)
{
text4 = text4 + text5 + "\t";
}
StreamWriter writer1 = new StreamWriter("FactScan.log", true);
writer1.WriteLine(DateTime.Now.ToString());
writer1.WriteLine("Can not find the following {0} genes in 9999 database:\r\n\r\n" + text4, list1.Count);
writer1.WriteLine();
writer1.Close();
MessageBox.Show("Can not find the following " + list1.Count.ToString() + " genes:\r\n\r\n" + text4, "Not found items");
}
this.btnCancel.Text = "Finish";
this.btnCancel.Focus();
MessageBox.Show("Search Completed successfully!\r\n" + this.sq.Rows.Count.ToString() + " sequences added!", "Done");
}
}
catch (Exception exception1)
{
MessageBox.Show("Read 9999 Sequence Database Error: " + exception1.Message);
}
}
}
}
