public void MXGraphTest()
{
log.logStartPhase("MXGraph", "Texting Draw.io create/load/save");
folderNode rootNode = new folderNode();
rootNode.AttachSubfolders();
var dgml = new DirectedGraph();
dgml.Populate <folderNode>(rootNode, x => x,
x => x.path,
x => x.caption,
true,
false);
mxGraph mxg = directedGraphToMXGraph.ConvertToMXGraph(dgml);
String drawio_path = folderResults.pathFor("MXGraphTest.drawio", imbSCI.Data.enums.getWritableFileMode.overwrite, "Resaving loaded DMGL object");
String drawio_jpg = folderResults.pathFor("MXGraphTest.jpg", imbSCI.Data.enums.getWritableFileMode.overwrite, "Resaving loaded DMGL object");
Image img = mxCellRenderer.CreateImage(mxg, mxg.GetChildCells(mxg, false, false), 1.0, Color.LightGray, true, new mxRectangle(0, 0, 1000, 500));
img.Save(drawio_jpg, ImageFormat.Jpeg);
var doc = new XmlDocument();
mxCodec codec = new mxCodec();
XmlNode node = codec.Encode(mxg.Model);
doc.LoadXml(node.OuterXml);
doc.Save(drawio_path);
log.logEndPhase();
}
/// <summary>
/// Directeds the graph test.
/// </summary>
public void DirectedGraphTest()
{
DirectedGraph dgml = new DirectedGraph();
log.logStartPhase("TEST01", "Creating DirectedGraph from string list of paths");
StringBuilder sb = new StringBuilder();
sb.AppendLine("/A/B/B/C");
sb.AppendLine("/A/B2/B/C");
sb.AppendLine("/A/B2/B1/C");
sb.AppendLine("/A/B2/B2/C");
sb.AppendLine("/A/B2/B3/C");
List <String> spl = sb.ToString().Split(new String[] { Environment.NewLine }, StringSplitOptions.RemoveEmptyEntries).ToList();
var g = graphTools.BuildGraphFromPaths <graphNode>(spl, "/");
dgml = g.ConvertToDGML();
var TP1 = folderResults.pathFor("test01_usingConvertor.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "");
dgml.Save(TP1);
dgml = new DirectedGraph();
dgml.Populate <IObjectWithPathAndChildren>(g, x => x,
x => x.name,
x => x.path,
true,
false);
var TP2 = folderResults.pathFor("test01_usingPopulateExtension.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "");
dgml.Save(TP2);
log.logEndPhase();
log.logStartPhase("TEST02", "Creating DirectedGraph from application root folder");
folderNode rootNode = new folderNode();
rootNode.AttachSubfolders();
dgml = new DirectedGraph();
dgml.Populate <folderNode>(rootNode, x => x,
x => x.path,
x => x.caption,
true,
false);
var TP3 = folderResults.pathFor("test02.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "");
dgml.Save(TP3);
log.logEndPhase();
log.logStartPhase("TEST03", "Creating DirectedGraph with reflection");
Type graphNodeBaseType = typeof(graphNodeBase);
dgml = new DirectedGraph();
dgml.Populate <Type>(graphNodeBaseType.GetBaseTypeList(true),
x => x.GetProperties(System.Reflection.BindingFlags.Instance | System.Reflection.BindingFlags.Public).Select(y => y.PropertyType).ToList(),
x => x.Name,
x => x.Name,
true,
false);
var TP4 = folderResults.pathFor("test03.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "");
dgml.Save(TP4);
log.logEndPhase();
log.logStartPhase("TEST04", "Testing Load and Save methods for DirectGraph");
DirectedGraph.Load <DirectedGraph>(TP1).Save(folderResults.pathFor("loadsave_test01.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "Resaving loaded DMGL object"));
DirectedGraph.Load <DirectedGraph>(TP2).Save(folderResults.pathFor("loadsave_test02.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "Resaving loaded DMGL object"));
DirectedGraph.Load <DirectedGraph>(TP3).Save(folderResults.pathFor("loadsave_test03.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "Resaving loaded DMGL object"));
DirectedGraph.Load <DirectedGraph>(TP4).Save(folderResults.pathFor("loadsave_test04.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "Resaving loaded DMGL object"));
log.logEndPhase();
DotGraph dotGraph = new DotGraph("test", true);
dotGraph.Nodes.AddRange(dgml.Nodes);
dotGraph.Links.AddRange(dgml.Links);
String dot_path = folderResults.pathFor("DOTTest.dot", imbSCI.Data.enums.getWritableFileMode.overwrite, "DGML to DOT");
dotGraph.Save(dot_path, imbSCI.Data.enums.getWritableFileMode.overwrite);
//log.logStartPhase("TEST05","Exporting to draw.io");
}
/// <summary>
/// Generates the report set directory readme file.
/// </summary>
/// <param name="filename">The filename.</param>
public void GenerateParentReadmeFile(String filename = "experiments_readme.txt")
{
folderNode node = folder;
//if (folder.parent != null)
//{
// node = folder.parent as folderNode;
//}
//else
//{
// DirectoryInfo di = folder;
// DirectoryInfo dip = di.Parent;
// node = dip;
// node.caption = dip.Name;
// node.description = "Report data set on group of experiments";
//}
StringBuilder sb = new StringBuilder();
// <--------- ---- ---- -- ------ DESCRIPTION GENERATION
String ln = "# Report package [" + node.caption + "]";
sb.AppendLine(ln);
String line = "-".Repeat(ln.Length);
sb.AppendLine(line);
sb.AppendLine("This directory contains integral reports on performed experiments on web site classification, done with imbWBI library - part of imbVeles Framework.");
sb.AppendLine("Each subdirectory contains reports on one particular configuration, tested on a range of semantic term expansion (Stx) values.");
sb.AppendLine(line);
sb.AppendLine();
sb.AppendLine("Main directory structure:");
sb.AppendLine("-- exp_[experient code name]");
sb.AppendLine("-- exp_[experient code name]");
sb.AppendLine("-- ... ");
sb.AppendLine("-- Summary");
sb.AppendLine();
sb.AppendLine(line);
sb.AppendLine();
sb.AppendLine("## Experiment subdirectories");
sb.AppendLine("In the subdirectories named exp_[experiment code name] you will find summary text, spreadsheet and XML data files - describing the experiment.");
sb.AppendLine("Wherever an Excel spreadsheet file is generated (in XLSX format), you'll find a subfolder named [data] where the same data is exported in Comma Separated Values (CSV) format for easier consumption by 3rd party software.");
sb.AppendLine("-- In Excel spreadsheet files you'll find second sheet called LEGEND, where each column in the report is explained. The same column descriptions are saved in plain text format within [data] subfolders.");
sb.AppendLine("In each subdirectory of this data set, across the complete directory tree, you will find [directory_readme.txt] where content of the subdirectory is described.");
sb.AppendLine("Exact content of the experiment report subdirectores varies depending on reporting options used and version of the software.");
sb.AppendLine();
sb.AppendLine("However, there is general directory tree structure:");
sb.AppendLine("-- exp_[experient code name]");
sb.AppendLine("-- -- [name of FVE]_[sample randomization tag]_E[Stx] <- directory with report on experiment version, performed with Stx number of semantic term expansion steps");
sb.AppendLine("-- -- -- [name of FVE]_[sample randomization tag]_E[Stx]00[fold id] <- directory with report on [fold id] fold of k-fold schema used");
sb.AppendLine("-- -- -- -- cases <- XML serialized data on Category Knowledge, constructed in this fold (from the training sample subset)");
sb.AppendLine("-- -- General <- general report on the complete data set, different in scope depending on reporting options used");
sb.AppendLine("-- -- SharedKnowledge <- XML serialized data (Lemma Tables) on all Cases in the data set");
sb.AppendLine("-- -- errors <- Here you might find logs on exceptions, if an error during execution happen. ");
sb.AppendLine(" | However, if the note.txt file is not empty - it should have earlier time/date creation stamp then the rest of the report.");
sb.AppendLine(" | Only reports with error notes that should exist in this data set are the ones where Semantic Cloud");
sb.AppendLine(" | failed to be created because of small amount of training data in the fold.");
sb.AppendLine();
sb.AppendLine("## Summary directory");
sb.AppendLine("In the [Summary] directory, you will find aggregated overview reports on all experiments in this group. The reports are created separately for each [k] number of k-fold schemas.");
sb.AppendLine("These reports are given in spreadsheet format (Excel file, and CSV in [data] subfolder) and in form of native XML serialized objects.");
sb.AppendLine("Additional remarks:");
sb.AppendLine("-- Reports may contain some additional metrics, subreports and other records, not mentioned nor explained in the research article. Like: ModelMetrics.xml. ");
sb.AppendLine("-- These are some unfinished ideas, models for FVE evaluation that, at the end, were not used for research conclusions nor system validation.");
sb.AppendLine();
Double f1 = Double.MinValue;
secondaryReportOnFVE topFVE = null;
sb.AppendLine(line);
sb.AppendLine("## List of the experiments contained in this data set");
Int32 c = 1;
foreach (var item in items)
{
ln = "[" + c.ToString("D2") + "] " + item.experiment.name + " (sub experiments: " + item.items.Count.ToString() + ")";
sb.AppendLine(ln);
if (f1 < item.topPerformer.F1Score)
{
topFVE = item.topPerformer;
f1 = item.topPerformer.F1Score;
}
c++;
}
sb.AppendLine(line);
sb.AppendLine();
sb.AppendLine("imbVeles Framework | imbWBI | GNU GPL v3.0 | http://blog.veles.rs | Goran Grubić | [email protected]");
sb.AppendLine(line);
sb.AppendLine("File generated: " + DateTime.Now.ToLongDateString() + ", " + DateTime.Now.ToLongTimeString());
// <---------
String p = node.pathFor(filename, imbSCI.Data.enums.getWritableFileMode.overwrite, "ReadMe file describing experiment reports contained in this report set.");
File.WriteAllText(p, sb.ToString());
node.AttachSubfolders();
if (DoGenerateGraph)
{
var dgml = node.GetDirectedGraph(false, false, false, 3);
dgml.Layout = imbSCI.Graph.DGML.enums.GraphLayoutEnum.DependencyMatrix;
dgml.GraphDirection = imbSCI.Graph.DGML.enums.GraphDirectionEnum.LeftToRight;
dgml.Save(node.pathFor("directoryGraph.dgml", imbSCI.Data.enums.getWritableFileMode.overwrite, "Directory structure Directed Graph in Microsoft DGML format - open in Visual Studio", true));
//var dot = dgml.ConvertToDOT();
//dot.Save(node.pathFor("directoryGraph.dot", imbSCI.Data.enums.getWritableFileMode.overwrite, "Directory structure Directed Graph in GraphVIZ DOT graph language format", true));
}
node.generateReadmeFiles(appManager.AppInfo);
}