public void Test_At()
{
System.Diagnostics.Stopwatch timer = new System.Diagnostics.Stopwatch();
timer.Start();
double sum = 0.0;
for (uint i = 0; i < extraction_metric_set.size(); i++)
{
sum += extraction_metric_set.at(i).focus_score(0);
}
timer.Stop();
System.Console.WriteLine("At - Sum focus: " + timer.Elapsed.Hours + " : " + timer.Elapsed.Minutes + " : " + timer.Elapsed.Seconds);
}
protected void SetUp()
{
base_cycle_metric_header header = new base_cycle_metric_header();
if(metrics.Count == 0)
{
System.Diagnostics.Stopwatch timer = new System.Diagnostics.Stopwatch();
timer.Start();
float[] focus1 = new float[]{2.24664021f, 2.1896739f, 0, 0};
ushort[] p90_1 = new ushort[]{302, 273, 0, 0};
for(uint lane = 1;lane <=8;lane++)
{
for(uint tile = 1;tile <=TileCount;tile++)
{
for(uint cycle = 1;cycle <=318;cycle++)
{
metrics.Add(new extraction_metric(lane, tile, cycle, new csharp_date_time(9859129975844165472ul), (p90_1), (focus1), 4));
}
}
}
extraction_metric_set = new base_extraction_metrics(metrics, Version, header);
timer.Stop();
System.Console.WriteLine("Setup: " + timer.Elapsed.Hours +" : " + timer.Elapsed.Minutes +" : " + timer.Elapsed.Seconds);
System.Console.WriteLine("Size: " + metrics.Count + " - " + extraction_metric_set.size());
}
}
protected void SetUp()
{
extraction_metric_header header = new extraction_metric_header(2);
if (metrics.Count == 0)
{
System.Diagnostics.Stopwatch timer = new System.Diagnostics.Stopwatch();
timer.Start();
float[] focus1 = new float[] { 2.24664021f, 2.1896739f, 0, 0 };
ushort[] p90_1 = new ushort[] { 302, 273, 0, 0 };
for (uint lane = 1; lane <= 8; lane++)
{
for (uint tile = 1; tile <= TileCount; tile++)
{
for (uint cycle = 1; cycle <= 318; cycle++)
{
metrics.Add(new extraction_metric(lane, tile, cycle, new csharp_date_time(9859129975844165472ul), (p90_1), (focus1), 4));
}
}
}
extraction_metric_set = new base_extraction_metrics(metrics, Version, header);
timer.Stop();
System.Console.WriteLine("Setup: " + timer.Elapsed.Hours + " : " + timer.Elapsed.Minutes + " : " + timer.Elapsed.Seconds);
System.Console.WriteLine("Size: " + metrics.Count + " - " + extraction_metric_set.size());
}
}
public void TestHardCodedBinaryData()
{
Assert.AreEqual(expected_metric_set.version(), actual_metric_set.version());
Assert.AreEqual(expected_metric_set.size(), actual_metric_set.size());
for (uint i = 0; i < Math.Min(expected_metric_set.size(), actual_metric_set.size()); i++)
{
Assert.AreEqual(expected_metric_set.at(i).lane(), actual_metric_set.at(i).lane());
Assert.AreEqual(expected_metric_set.at(i).tile(), actual_metric_set.at(i).tile());
Assert.AreEqual(expected_metric_set.at(i).cycle(), actual_metric_set.at(i).cycle());
Assert.AreEqual(expected_metric_set.at(i).date_time_csharp().value, actual_metric_set.at(i).date_time_csharp().value);
for (uint j = 0; j < Math.Min(expected_metric_set.at(i).channel_count(), actual_metric_set.at(i).channel_count()); j++)
{
Assert.AreEqual(expected_metric_set.at(i).max_intensity(j), actual_metric_set.at(i).max_intensity(j));
Assert.AreEqual(expected_metric_set.at(i).focusScore(j), actual_metric_set.at(i).focusScore(j));
}
}
}
public void TestDispose()
{
run_metrics tmp = new run_metrics();
using (base_extraction_metrics set = tmp.extraction_metric_set())
{
ushort_vector tmp1 = new ushort_vector();
float_vector tmp2 = new float_vector();
set.insert(new extraction_metric(1, 1, 1, tmp1, tmp2));
}
using (base_extraction_metrics set = tmp.extraction_metric_set())
{
Assert.AreEqual((int)set.size(), 1);
}
using (base_extraction_metrics set = tmp.extraction_metric_set())
{
Assert.AreEqual((int)set.at(0).lane(), 1);
}
}