public Xic GetProductExtractedIonChromatogram(double minMz, double maxMz, double precursorIonMz)
{
var xic = new Xic();
foreach (var isolationWindow in GetIsoWindows(precursorIonMz))
{
var peakList = _isoWindowToChromPeaks[isolationWindow];
xic.AddRange(GetXicPointsWithin(minMz, maxMz, peakList));
}
xic.Sort();
return Xic.GetSelectedXic(xic);
}
public Xic GetProductExtractedIonChromatogram(double minMz, double maxMz, double precursorIonMz)
{
var xic = new Xic();
foreach (var isolationWindow in GetIsoWindows(precursorIonMz))
{
var peakList = _isoWindowToChromPeaks[isolationWindow];
xic.AddRange(GetXicPointsWithin(minMz, maxMz, peakList));
}
xic.Sort();
return(Xic.GetSelectedXic(xic));
}
public new Xic GetFullProductExtractedIonChromatogram(double minMz, double maxMz, double precursorIonMz)
{
var xic = GetProductExtractedIonChromatogram(minMz, maxMz, precursorIonMz);
var scanToXicPoint = new XicPoint[MaxLcScan - MinLcScan + 1];
foreach (var xicPoint in xic)
{
scanToXicPoint[xicPoint.ScanNum - MinLcScan] = xicPoint;
}
var newXic = new Xic();
newXic.AddRange(GetFragmentationSpectraScanNums(precursorIonMz).Select(scanNum => scanToXicPoint[scanNum - MinLcScan] ?? new XicPoint(scanNum, 0, 0)));
return(newXic);
}
public new Xic GetFullProductExtractedIonChromatogram(double minMz, double maxMz, double precursorIonMz)
{
var xic = GetProductExtractedIonChromatogram(minMz, maxMz, precursorIonMz);
var scanToXicPoint = new XicPoint[MaxLcScan - MinLcScan + 1];
foreach (var xicPoint in xic) scanToXicPoint[xicPoint.ScanNum - MinLcScan] = xicPoint;
var newXic = new Xic();
newXic.AddRange(GetFragmentationSpectraScanNums(precursorIonMz).Select(scanNum => scanToXicPoint[scanNum - MinLcScan] ?? new XicPoint(scanNum, 0, 0)));
return newXic;
}
