public StreamingWordFeatures(WordFeatures simple_features) : this(modshogunPINVOKE.new_StreamingWordFeatures__SWIG_3(WordFeatures.getCPtr(simple_features)), true)
{
if (modshogunPINVOKE.SWIGPendingException.Pending)
{
throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
}
public WordFeatures(WordFeatures orig) : this(modshogunPINVOKE.new_WordFeatures__SWIG_2(WordFeatures.getCPtr(orig)), true)
{
if (modshogunPINVOKE.SWIGPendingException.Pending)
{
throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
}
public StreamingWordFeatures(WordFeatures simple_features, SWIGTYPE_p_double lab) : this(modshogunPINVOKE.new_StreamingWordFeatures__SWIG_2(WordFeatures.getCPtr(simple_features), SWIGTYPE_p_double.getCPtr(lab)), true)
{
if (modshogunPINVOKE.SWIGPendingException.Pending)
{
throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
}
public void set_motif_positions(WordFeatures positions_lhs, WordFeatures positions_rhs)
{
modshogunPINVOKE.RegulatoryModulesStringKernel_set_motif_positions(swigCPtr, WordFeatures.getCPtr(positions_lhs), WordFeatures.getCPtr(positions_rhs));
if (modshogunPINVOKE.SWIGPendingException.Pending)
{
throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
}
public bool obtain_from_simple(WordFeatures sf)
{
bool ret = modshogunPINVOKE.SparseWordFeatures_obtain_from_simple(swigCPtr, WordFeatures.getCPtr(sf));
if (modshogunPINVOKE.SWIGPendingException.Pending)
{
throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
return(ret);
}
public WordFeatures get_transposed()
{
IntPtr cPtr = modshogunPINVOKE.WordFeatures_get_transposed(swigCPtr);
WordFeatures ret = (cPtr == IntPtr.Zero) ? null : new WordFeatures(cPtr, true);
if (modshogunPINVOKE.SWIGPendingException.Pending)
{
throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
return(ret);
}
public static void Main()
{
modshogun.init_shogun_with_defaults();
double scale = 1.2;
double[,] traindata_real = Load.load_numbers("../data/fm_train_word.dat");
double[,] testdata_real = Load.load_numbers("../data/fm_test_word.dat");
short[,] traindata_word = new short[traindata_real.GetLength(0), traindata_real.GetLength(1)];
for (int i = 0; i < traindata_real.GetLength(0); i++)
{
for (int j = 0; j < traindata_real.GetLength(1); j++)
{
traindata_word[i, j] = (short)traindata_real[i, j];
}
}
short[,] testdata_word = new short[testdata_real.GetLength(0), testdata_real.GetLength(1)];
for (int i = 0; i < testdata_real.GetLength(0); i++)
{
for (int j = 0; j < testdata_real.GetLength(1); j++)
{
testdata_word[i, j] = (short)testdata_real[i, j];
}
}
WordFeatures feats_train = new WordFeatures(traindata_word);
WordFeatures feats_test = new WordFeatures(testdata_word);
LinearKernel kernel = new LinearKernel(feats_train, feats_test);
kernel.set_normalizer(new AvgDiagKernelNormalizer(scale));
kernel.init(feats_train, feats_train);
double[,] km_train = kernel.get_kernel_matrix();
kernel.init(feats_train, feats_test);
double[,] km_test = kernel.get_kernel_matrix();
foreach (double item in km_train)
{
Console.Write(item);
}
foreach (double item in km_test)
{
Console.Write(item);
}
modshogun.exit_shogun();
}
public static void Main()
{
modshogun.init_shogun_with_defaults();
double scale = 1.2;
double[,] traindata_real = Load.load_numbers("../data/fm_train_word.dat");
double[,] testdata_real = Load.load_numbers("../data/fm_test_word.dat");
short[,] traindata_word = new short[traindata_real.GetLength(0), traindata_real.GetLength(1)];
for (int i = 0; i < traindata_real.GetLength(0); i++){
for (int j = 0; j < traindata_real.GetLength(1); j++)
traindata_word[i, j] = (short)traindata_real[i, j];
}
short[,] testdata_word = new short[testdata_real.GetLength(0), testdata_real.GetLength(1)];
for (int i = 0; i < testdata_real.GetLength(0); i++){
for (int j = 0; j < testdata_real.GetLength(1); j++)
testdata_word[i, j] = (short)testdata_real[i, j];
}
WordFeatures feats_train = new WordFeatures(traindata_word);
WordFeatures feats_test = new WordFeatures(testdata_word);
LinearKernel kernel = new LinearKernel(feats_train, feats_test);
kernel.set_normalizer(new AvgDiagKernelNormalizer(scale));
kernel.init(feats_train, feats_train);
double[,] km_train = kernel.get_kernel_matrix();
kernel.init(feats_train, feats_test);
double[,] km_test = kernel.get_kernel_matrix();
foreach(double item in km_train) {
Console.Write(item);
}
foreach(double item in km_test) {
Console.Write(item);
}
modshogun.exit_shogun();
}
static void Main(string[] argv)
{
modshogun.init_shogun_with_defaults();
double scale = 1.2;
DoubleMatrix traindata_real = Load.load_numbers("../data/fm_train_word.dat");
DoubleMatrix testdata_real = Load.load_numbers("../data/fm_test_word.dat");
WordFeatures feats_train = new WordFeatures(traindata_real);
WordFeatures feats_test = new WordFeatures(testdata_real);
LinearKernel kernel = new LinearKernel(feats_train, feats_test);
kernel.set_normalizer(new AvgDiagKernelNormalizer(scale));
kernel.init(feats_train, feats_train);
DoubleMatrix km_train = kernel.get_kernel_matrix();
kernel.init(feats_train, feats_test);
DoubleMatrix km_test = kernel.get_kernel_matrix();
Console.WriteLine(km_train.ToString());
Console.WriteLine(km_test.ToString());
modshogun.exit_shogun();
}
public void set_motif_positions(WordFeatures positions_lhs, WordFeatures positions_rhs) {
modshogunPINVOKE.RegulatoryModulesStringKernel_set_motif_positions(swigCPtr, WordFeatures.getCPtr(positions_lhs), WordFeatures.getCPtr(positions_rhs));
if (modshogunPINVOKE.SWIGPendingException.Pending) throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
public WordFeatures(WordFeatures orig) : this(modshogunPINVOKE.new_WordFeatures__SWIG_2(WordFeatures.getCPtr(orig)), true) {
if (modshogunPINVOKE.SWIGPendingException.Pending) throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
internal static HandleRef getCPtr(WordFeatures obj) {
return (obj == null) ? new HandleRef(null, IntPtr.Zero) : obj.swigCPtr;
}
public StreamingWordFeatures(WordFeatures simple_features, SWIGTYPE_p_double lab) : this(modshogunPINVOKE.new_StreamingWordFeatures__SWIG_2(WordFeatures.getCPtr(simple_features), SWIGTYPE_p_double.getCPtr(lab)), true) {
if (modshogunPINVOKE.SWIGPendingException.Pending) throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
public StreamingWordFeatures(WordFeatures simple_features) : this(modshogunPINVOKE.new_StreamingWordFeatures__SWIG_3(WordFeatures.getCPtr(simple_features)), true) {
if (modshogunPINVOKE.SWIGPendingException.Pending) throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
internal static HandleRef getCPtr(WordFeatures obj)
{
return((obj == null) ? new HandleRef(null, IntPtr.Zero) : obj.swigCPtr);
}
public RegulatoryModulesStringKernel(StringCharFeatures lstr, StringCharFeatures rstr, WordFeatures lpos, WordFeatures rpos, double width, int degree, int shift, int window) : this(modshogunPINVOKE.new_RegulatoryModulesStringKernel__SWIG_3(StringCharFeatures.getCPtr(lstr), StringCharFeatures.getCPtr(rstr), WordFeatures.getCPtr(lpos), WordFeatures.getCPtr(rpos), width, degree, shift, window), true)
{
if (modshogunPINVOKE.SWIGPendingException.Pending)
{
throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
}
public RegulatoryModulesStringKernel(StringCharFeatures lstr, StringCharFeatures rstr, WordFeatures lpos, WordFeatures rpos, double width, int degree, int shift, int window) : this(modshogunPINVOKE.new_RegulatoryModulesStringKernel__SWIG_3(StringCharFeatures.getCPtr(lstr), StringCharFeatures.getCPtr(rstr), WordFeatures.getCPtr(lpos), WordFeatures.getCPtr(rpos), width, degree, shift, window), true) {
if (modshogunPINVOKE.SWIGPendingException.Pending) throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
