/// <summary>
/// Execute the EDFS starting with the vertex s
/// </summary>
/// <param name="v">Starting vertex</param>
public void Compute(IVertex v)
{
if (v == null)
{
throw new ArgumentNullException("entry point");
}
Initialize();
// start whith him:
OnStartVertex(v);
// process each out edge of v
foreach (IEdge e in VisitedGraph.InEdges(v))
{
if (EdgeColors[e] == GraphColor.White)
{
OnStartEdge(e);
Visit(e, 0);
}
}
// process the rest of the graph edges
foreach (IEdge e in VisitedGraph.Edges)
{
if (EdgeColors[e] == GraphColor.White)
{
OnStartEdge(e);
Visit(e, 0);
}
}
}
private void InitAlgorithm()
{
vertices = new LinLogVertex[VisitedGraph.VertexCount];
var vertexMap = new Dictionary <TVertex, LinLogVertex>();
//vertexek indexelése
int i = 0;
foreach (TVertex v in VisitedGraph.Vertices)
{
vertices[i] = new LinLogVertex
{
Index = i,
OriginalVertex = v,
Attractions = new LinLogEdge[VisitedGraph.Degree(v)],
RepulsionWeight = 0,
Position = VertexPositions[v]
};
vertexMap[v] = vertices[i];
i++;
}
//minden vertex-hez felépíti az attractionWeights, attractionIndexes,
//és a repulsionWeights struktúrát, valamint átmásolja a pozícióját a VertexPositions-ból
foreach (var v in vertices)
{
int attrIndex = 0;
foreach (var e in VisitedGraph.InEdges(v.OriginalVertex))
{
double weight = e is WeightedEdge <TVertex>?((e as WeightedEdge <TVertex>).Weight) : 1;
v.Attractions[attrIndex] = new LinLogEdge
{
Target = vertexMap[e.Source],
AttractionWeight = weight
};
//TODO look at this line below
//v.RepulsionWeight += weight;
v.RepulsionWeight += 1;
attrIndex++;
}
foreach (var e in VisitedGraph.OutEdges(v.OriginalVertex))
{
double weight = e is WeightedEdge <TVertex>?((e as WeightedEdge <TVertex>).Weight) : 1;
v.Attractions[attrIndex] = new LinLogEdge
{
Target = vertexMap[e.Target],
AttractionWeight = weight
};
//v.RepulsionWeight += weight;
v.RepulsionWeight += 1;
attrIndex++;
}
v.RepulsionWeight = Math.Max(v.RepulsionWeight, Parameters.gravitationMultiplier);
}
repulsionMultiplier = ComputeRepulsionMultiplier();
}
/// <summary>
/// Does a depth first search on the vertex u
/// </summary>
/// <param name="u">vertex to explore</param>
/// <param name="depth">current recursion depth</param>
/// <exception cref="ArgumentNullException">u cannot be null</exception>
public void Visit(IVertex u, int depth)
{
if (depth > this.maxDepth)
{
return;
}
if (u == null)
{
throw new ArgumentNullException("u");
}
Colors[u] = GraphColor.Gray;
OnDiscoverVertex(u);
IVertex v = null;
foreach (IEdge e in VisitedGraph.OutEdges(u))
{
OnExamineOutEdge(e);
v = e.Target;
GraphColor c = Colors[v];
if (c == GraphColor.White)
{
OnTreeOutEdge(e);
Visit(v, depth + 1);
}
else if (c == GraphColor.Gray)
{
OnBackOutEdge(e);
}
else
{
OnForwardOrCrossOutEdge(e);
}
}
foreach (IEdge e in VisitedGraph.InEdges(u))
{
OnExamineInEdge(e);
v = e.Source;
GraphColor c = Colors[v];
if (c == GraphColor.White)
{
OnTreeInEdge(e);
Visit(v, depth + 1);
}
else if (c == GraphColor.Gray)
{
OnBackInEdge(e);
}
else
{
OnForwardOrCrossInEdge(e);
}
}
Colors[u] = GraphColor.Black;
OnFinishVertex(u);
}
private void InitAlgorithm()
{
_vertices = new LinLogVertex[VisitedGraph.VertexCount];
var verticesMap = new Dictionary <TVertex, LinLogVertex>();
// Index vertices
int i = 0;
foreach (TVertex vertex in VisitedGraph.Vertices)
{
_vertices[i] = new LinLogVertex(i, vertex, new LinLogEdge[VisitedGraph.Degree(vertex)])
{
RepulsionWeight = 0,
Position = VerticesPositions[vertex]
};
verticesMap[vertex] = _vertices[i];
++i;
}
// Compute best attraction weight and attraction index for each vertex
foreach (LinLogVertex vertex in _vertices)
{
int attractionIndex = 0;
foreach (TEdge edge in VisitedGraph.InEdges(vertex.OriginalVertex))
{
var weightedEdge = edge as WeightedEdge <TVertex>;
double weight = weightedEdge?.Weight ?? 1;
vertex.Attractions[attractionIndex] = new LinLogEdge(verticesMap[edge.Source], weight);
// TODO update repulsion weight?
++vertex.RepulsionWeight;
++attractionIndex;
}
foreach (TEdge edge in VisitedGraph.OutEdges(vertex.OriginalVertex))
{
var weightedEdge = edge as WeightedEdge <TVertex>;
double weight = weightedEdge?.Weight ?? 1;
vertex.Attractions[attractionIndex] = new LinLogEdge(verticesMap[edge.Target], weight);
++vertex.RepulsionWeight;
++attractionIndex;
}
vertex.RepulsionWeight = Math.Max(vertex.RepulsionWeight, Parameters.GravitationMultiplier);
}
_repulsionMultiplier = ComputeRepulsionMultiplier();
}
private void BuildTemporaryGraphs(
[NotNull] ICollection <TVertex> side1,
[NotNull] ICollection <TVertex> side2,
[NotNull] out BidirectionalGraph <TVertex, Edge <TVertex> > graph1,
[NotNull] out BidirectionalGraph <TVertex, TEdge> graph2)
{
//
// The IN side
//
// on the IN side we should reverse the edges
graph1 = new BidirectionalGraph <TVertex, Edge <TVertex> >();
graph1.AddVertexRange(side1);
foreach (TVertex vertex in side1)
{
VerticesInfos[vertex] = DoubleTreeVertexType.Backward;
foreach (TEdge edge in VisitedGraph.InEdges(vertex))
{
if (!side1.Contains(edge.Source) || edge.IsSelfEdge())
{
continue;
}
// Reverse the edge
graph1.AddEdge(new Edge <TVertex>(edge.Target, edge.Source));
}
}
//
// The OUT side
//
graph2 = new BidirectionalGraph <TVertex, TEdge>();
graph2.AddVertexRange(side2);
foreach (TVertex vertex in side2)
{
VerticesInfos[vertex] = DoubleTreeVertexType.Forward;
foreach (TEdge edge in VisitedGraph.OutEdges(vertex))
{
if (!side2.Contains(edge.Target) || edge.IsSelfEdge())
{
continue;
}
// Simply add the edge
graph2.AddEdge(edge);
}
}
}
public int GetBalancingIndex([NotNull] TVertex vertex)
{
if (vertex == null)
{
throw new ArgumentNullException(nameof(vertex));
}
int balancingIndex = VisitedGraph.OutEdges(vertex).Sum(edge => _preFlow[edge]);
foreach (TEdge edge in VisitedGraph.InEdges(vertex))
{
int preFlow = _preFlow[edge];
balancingIndex -= preFlow;
}
return(balancingIndex);
}
/// <summary>
/// Visits vertex s
/// </summary>
/// <param name="u">vertex to visit</param>
public void Visit(IVertex u)
{
VertexEventArgs uArgs = new VertexEventArgs(u);
Colors[u] = GraphColor.Gray;
OnDiscoverVertex(u);
IEdgeEnumerable outEdges = VisitedGraph.OutEdges(u);
VisitEdges(outEdges, true);
IEdgeEnumerable intEdges = VisitedGraph.InEdges(u);
VisitEdges(intEdges, false);
Colors[u] = GraphColor.Black;
OnFinishVertex(u);
}
/// <inheritdoc />
protected override void InternalCompute()
{
ICancelManager cancelManager = Services.CancelManager;
InitializeInDegrees();
while (_heap.Count != 0)
{
if (cancelManager.IsCancelling)
{
break;
}
TVertex vertex = _heap.Dequeue();
if (InDegrees[vertex] != 0)
{
throw new NonAcyclicGraphException();
}
SortedVertices.Add(vertex);
OnVertexAdded(vertex);
// Update the count of its successor vertices
IEnumerable <TEdge> successorEdges = _direction == TopologicalSortDirection.Forward
? VisitedGraph.OutEdges(vertex)
: VisitedGraph.InEdges(vertex);
foreach (TEdge edge in successorEdges)
{
if (edge.IsSelfEdge())
{
continue;
}
TVertex successor = _direction == TopologicalSortDirection.Forward
? edge.Target
: edge.Source;
--InDegrees[successor];
Debug.Assert(InDegrees[successor] >= 0);
_heap.Update(successor);
}
}
}
public void Visit(TVertex u, int depth)
{
if (depth > this.maxDepth)
{
return;
}
if (u == null)
{
throw new ArgumentNullException("u");
}
if (this.IsAborting)
{
return;
}
VertexColors[u] = GraphColor.Gray;
OnDiscoverVertex(u);
TVertex v = default(TVertex);
foreach (TEdge e in VisitedGraph.OutEdges(u))
{
if (this.IsAborting)
{
return;
}
OnExamineEdge(e);
v = e.Target;
ProcessEdge(depth, v, e);
}
foreach (TEdge e in VisitedGraph.InEdges(u))
{
if (this.IsAborting)
{
return;
}
OnExamineEdge(e);
v = e.Source;
ProcessEdge(depth, v, e);
}
VertexColors[u] = GraphColor.Black;
OnFinishVertex(u);
}
public void Visit(TVertex u, int depth)
{
Contract.Requires(u != null);
if (depth > this.maxDepth)
{
return;
}
VertexColors[u] = GraphColor.Gray;
OnDiscoverVertex(u);
var cancelManager = this.Services.CancelManager;
TVertex v = default(TVertex);
foreach (var e in VisitedGraph.OutEdges(u))
{
if (cancelManager.IsCancelling)
{
return;
}
OnExamineEdge(e);
v = e.Target;
ProcessEdge(depth, v, e);
}
foreach (var e in VisitedGraph.InEdges(u))
{
if (cancelManager.IsCancelling)
{
return;
}
OnExamineEdge(e);
v = e.Source;
ProcessEdge(depth, v, e);
}
VertexColors[u] = GraphColor.Black;
OnFinishVertex(u);
}
/// <summary>
/// Does a depth first search on the vertex u
/// </summary>
/// <param name="se">edge to explore</param>
/// <param name="depth">current exploration depth</param>
/// <exception cref="ArgumentNullException">se cannot be null</exception>
public void Visit(IEdge se, int depth)
{
if (depth > this.maxDepth)
{
return;
}
if (se == null)
{
throw new ArgumentNullException("se");
}
// mark edge as gray
EdgeColors[se] = GraphColor.Gray;
// add edge to the search tree
OnTreeEdge(se);
// iterate over out-edges
foreach (IEdge e in VisitedGraph.InEdges(se.Target))
{
// check edge is not explored yet,
// if not, explore it.
if (EdgeColors[e] == GraphColor.White)
{
OnDiscoverTreeEdge(se, e);
Visit(e, depth + 1);
}
else if (EdgeColors[e] == GraphColor.Gray)
{
// edge is being explored
OnBackEdge(e);
}
else
{
// edge is black
OnForwardOrCrossEdge(e);
}
}
// all out-edges have been explored
EdgeColors[se] = GraphColor.Black;
OnFinishEdge(se);
}
private void Visit([NotNull] TVertex u, int depth)
{
Debug.Assert(u != null);
if (depth > MaxDepth)
{
return;
}
VerticesColors[u] = GraphColor.Gray;
OnDiscoverVertex(u);
ICancelManager cancelManager = Services.CancelManager;
foreach (TEdge edge in VisitedGraph.OutEdges(u))
{
if (cancelManager.IsCancelling)
{
return;
}
OnExamineEdge(edge);
TVertex v = edge.Target;
ProcessEdge(depth, v, edge);
}
foreach (TEdge edge in VisitedGraph.InEdges(u))
{
if (cancelManager.IsCancelling)
{
return;
}
OnExamineEdge(edge);
TVertex v = edge.Source;
ProcessEdge(depth, v, edge);
}
VerticesColors[u] = GraphColor.Black;
OnVertexFinished(u);
}
/// <inheritdoc />
protected override void InternalCompute()
{
while (_heap.Count != 0)
{
ThrowIfCancellationRequested();
TVertex vertex = _heap.Dequeue();
if (InDegrees[vertex] != 0)
{
throw new NonAcyclicGraphException();
}
_sortedVertices.Add(vertex);
OnVertexAdded(vertex);
// Update the count of its successor vertices
IEnumerable <TEdge> successorEdges = _direction == TopologicalSortDirection.Forward
? VisitedGraph.OutEdges(vertex)
: VisitedGraph.InEdges(vertex);
foreach (TEdge edge in successorEdges)
{
TVertex successor = _direction == TopologicalSortDirection.Forward
? edge.Target
: edge.Source;
--InDegrees[successor];
Debug.Assert(InDegrees[successor] >= 0);
_heap.Update(successor);
}
}
SortedVertices = _sortedVertices.ToArray();
}
/// <inheritdoc />
protected override void InternalCompute()
{
TVertex root = GetAndAssertRootInGraph();
if (!TryGetTargetVertex(out TVertex target))
{
throw new InvalidOperationException("Target vertex not set.");
}
if (!VisitedGraph.ContainsVertex(target))
{
throw new VertexNotFoundException("Target vertex is not part of the graph.");
}
// Little shortcut
if (root.Equals(target))
{
OnTargetReached();
return; // Found it
}
ICancelManager cancelManager = Services.CancelManager;
var open = new BinaryHeap <double, TVertex>(_distanceRelaxer.Compare);
// (1) Place the initial node in Open, with all its operators marked unused
open.Add(0, root);
Dictionary <TEdge, GraphColor> operators = VisitedGraph.OutEdges(root).ToDictionary(edge => edge, edge => GraphColor.White);
while (open.Count > 0)
{
if (cancelManager.IsCancelling)
{
return;
}
// (3) Else, choose an Open node n of lowest cost for expansion
KeyValuePair <double, TVertex> entry = open.RemoveMinimum();
double cost = entry.Key;
TVertex n = entry.Value;
// (4) If node n is a target node, terminate with success
if (n.Equals(target))
{
OnTargetReached();
return;
}
// (5) Else, expand node n, generating all
// successors n' reachable via unused legal operators,
// compute their cost and delete node n
ExpandNode(n, operators, cost, open);
#if DEBUG
OperatorMaxCount = Math.Max(OperatorMaxCount, operators.Count);
#endif
// (6) In a directed graph, generate each predecessor node n via an unused operator
// and create dummy nodes for each with costs of infinity
foreach (TEdge edge in VisitedGraph.InEdges(n))
{
if (operators.TryGetValue(edge, out GraphColor edgeColor) &&
edgeColor == GraphColor.Gray)
{
// Delete node n
operators.Remove(edge);
}
}
}
}
protected override void InternalCompute()
{
//
// Separate the two sides
//
HashSet <TVertex> side1, side2;
SeparateSides(VisitedGraph, root, out side1, out side2);
#region Build the temporary graph for the two sides
//
// The IN side
//
//on the IN side we should reverse the edges
var graph1 = new BidirectionalGraph <TVertex, Edge <TVertex> >();
graph1.AddVertexRange(side1);
foreach (var v in side1)
{
vertexInfos[v] = DoubleTreeVertexType.Backward;
foreach (var e in VisitedGraph.InEdges(v))
{
if (!side1.Contains(e.Source) || e.Source.Equals(e.Target))
{
continue;
}
//reverse the edge
graph1.AddEdge(new Edge <TVertex>(e.Target, e.Source));
}
}
//
// The OUT side
//
var graph2 = new BidirectionalGraph <TVertex, TEdge>();
graph2.AddVertexRange(side2);
foreach (var v in side2)
{
vertexInfos[v] = DoubleTreeVertexType.Forward;
foreach (var e in VisitedGraph.OutEdges(v))
{
if (!side2.Contains(e.Target) || e.Source.Equals(e.Target))
{
continue;
}
//simply add the edge
graph2.AddEdge(e);
}
}
vertexInfos[root] = DoubleTreeVertexType.Center;
#endregion
LayoutDirection side2Direction = Parameters.Direction;
LayoutDirection side1Direction = Parameters.Direction;
switch (side2Direction)
{
case LayoutDirection.BottomToTop:
side1Direction = LayoutDirection.TopToBottom;
break;
case LayoutDirection.LeftToRight:
side1Direction = LayoutDirection.RightToLeft;
break;
case LayoutDirection.RightToLeft:
side1Direction = LayoutDirection.LeftToRight;
break;
case LayoutDirection.TopToBottom:
side1Direction = LayoutDirection.BottomToTop;
break;
}
//
// SimpleTree layout on the two side
//
var side1LayoutAlg = new SimpleTreeLayoutAlgorithm <TVertex, Edge <TVertex>, BidirectionalGraph <TVertex, Edge <TVertex> > >(
graph1, VertexPositions, vertexSizes,
new SimpleTreeLayoutParameters
{
LayerGap = Parameters.LayerGap,
VertexGap = Parameters.VertexGap,
Direction = side1Direction,
SpanningTreeGeneration = SpanningTreeGeneration.BFS
});
var side2LayoutAlg = new SimpleTreeLayoutAlgorithm <TVertex, TEdge, BidirectionalGraph <TVertex, TEdge> >(
graph2, VertexPositions, vertexSizes,
new SimpleTreeLayoutParameters
{
LayerGap = Parameters.LayerGap,
VertexGap = Parameters.VertexGap,
Direction = side2Direction,
SpanningTreeGeneration = SpanningTreeGeneration.BFS
});
side1LayoutAlg.Compute();
side2LayoutAlg.Compute();
//
// Merge the layouts
//
var side2Translate = side1LayoutAlg.VertexPositions[root] - side2LayoutAlg.VertexPositions[root];
foreach (var v in side1)
{
VertexPositions[v] = side1LayoutAlg.VertexPositions[v];
}
foreach (var v in side2)
{
VertexPositions[v] = side2LayoutAlg.VertexPositions[v] + side2Translate;
}
NormalizePositions();
}
