private ITaxonRank GetClassificationItem(Result result, TaxonRankType rank)
{
try
{
var name = result.Classification
.FirstOrDefault(c => string.Compare(c.Rank, rank.MapTaxonRankTypeToTaxonRankString(), true) == 0)
.Name;
return(new TaxonRankServiceModel
{
ScientificName = name,
Rank = rank
});
}
catch
{
return(null);
}
}
private void ReplaceTreatmentMetaClassificationItem(IDocument document, IEnumerable <ITaxonClassification> classification, string genus, TaxonRankType rank)
{
if (classification == null)
{
throw new ArgumentNullException(nameof(classification));
}
var matchingHigherTaxa = classification
.Select(c => c.Classification.SingleOrDefault(x => x.Rank == rank).ScientificName)
.Distinct()
.ToList();
var higherTaxaCount = matchingHigherTaxa.Count();
switch (higherTaxaCount)
{
case 0:
this.logger?.Log(LogType.Warning, "Zero matches for rank {0}.", rank);
break;
case 1:
{
string taxonName = matchingHigherTaxa.Single();
this.logger?.Log("{0}: {1}\t--\t{2}", genus, rank, taxonName);
string xpath = string.Format(TreatmentMetaReplaceXPathTemplate, genus, rank.MapTaxonRankTypeToTaxonRankString());
document.SelectNodes(xpath)
.AsParallel()
.ForAll(node =>
{
node.InnerText = taxonName;
});
}
break;
default:
{
this.logger?.Log(LogType.Warning, "Multiple matches for rank {0}:", rank);
foreach (string taxonName in matchingHigherTaxa)
{
this.logger?.Log("{0}: {1}\t--\t{2}", genus, rank, taxonName);
}
this.logger?.Log();
}
break;
}
}