public void FilterAndJoin()
{
//filter subjects by arms
if (Arms.Any())
{
Subjects = Subjects.FindAll(s => Arms.Select(a => a.Id).Contains(s.StudyArmId)).ToList();
}
Debug.WriteLine(Subjects.Count, " AFTER ARMS");
//filter subjects by studies
if (Studies.Any())
{
Subjects = Subjects.FindAll(subj => Studies.Select(st => st.Id).Contains(subj.StudyId)).ToList();
}
Debug.WriteLine(Subjects.Count, " AFTER Studies");
//filter subjects by subCharacteristics
if (SubjChars.Any())
{
Subjects = Subjects.FindAll(s => SubjChars.Select(sc => sc.SubjectId).Contains(s.Id)).ToList();
}
Debug.WriteLine(Subjects.Count, " AFTER SubjChars");
//filter by visits
//TODO
//TODO : WILL RETRIEVE SUBJECTS THAT HAVE SAME UNIQUE IDS ACROSS PROJECTS (i.e. need to load observations to Mongo with
//TODO: DB subjectId
//filter observations for filtered subjects
Observations = Observations?.FindAll(o => Subjects.Select(s => s.UniqueSubjectId).Contains(o.USubjId));
//filter subjects by selected observations
if (Observations.Any() && ObservationsFiltered)
{
Subjects = Subjects.FindAll(s => Observations.Select(o => o.USubjId).Contains(s.UniqueSubjectId));
}
Debug.WriteLine(Subjects.Count, " AFTER syncing with observations");
//FILTER SAMPLES BY SELECTED AND FILTERED SAMPLE CHARACTERISTICS
if (SampleCharacteristics.Any())
{
Samples = Samples.FindAll(s => SampleCharacteristics.Select(sc => sc.SampleId).Contains(s.Id)).ToList();
}
//TODO: TEMP FILTERING BY COLLECTION STUDY DAY
//SYNCHRONIZE SAMPLES AND SUBJECTS
if (Samples.Any())
{
Samples = Samples.FindAll(s => Subjects.Select(sc => sc.Id).Contains(s.SubjectId)).ToList();
Subjects = Subjects.FindAll(sb => Samples.Select(sp => sp.SubjectId).Contains(sb.Id)).ToList();
}
}
/// <inheritdoc />
public string GenerateIdentifier(StudyIdentity studyIdentity)
{
var current = SubjectIdentifiers.SingleOrDefault(_ => _.StudyId == studyIdentity.Id);
if (current == null)
{
if (!Studies.Any(_ => _.Id == studyIdentity.Id))
{
throw new InvalidOperationException($"No study found for {studyIdentity}");
}
current = SubjectIdentifiers.Add(new SubjectIdentifierEntity {
StudyId = studyIdentity
});
}
var id = current.CurrentValue += 1;
return($"{id:x16}");
}