public void RankScoreParamResources()
{
var methodName = MethodBase.GetCurrentMethod().Name;
Utils.ShowStarting(methodName);
const int ranks = 20;
var rankScorer = new RankScore(ActivationMethod.HCD, Ms2DetectorType.Iontrap, Enzyme.Trypsin,
Protocol.Standard);
for (var charge = 1; charge < 4; charge++)
{
var ionTypes = rankScorer.GetIonTypes(charge, 0);
foreach (var ionType in ionTypes)
{
for (var r = 0; r <= ranks; r++)
{
if (r < 4 || r > ranks - 4)
{
Console.WriteLine(@"Charge: {0}, Ion Type: {1}, Rank: {2}, Score: {3:F4}",
charge, ionType.Name, r, rankScorer.GetScore(ionType, r, charge, 0.0));
}
else if (r == 4)
{
Console.WriteLine(" ...");
}
}
Console.WriteLine();
}
Console.WriteLine();
}
}
internal void Clear()
{
CourseScoreList.Clear();
CourseIDs.Clear();
Scores.Clear();
RankResult = new RankScore(decimal.Zero, null);
}
public void RankScore()
{
var methodName = MethodBase.GetCurrentMethod().Name;
Utils.ShowStarting(methodName);
const int ranks = 20;
const string filePath = @"\\protoapps\UserData\Wilkins\DIA\DIA.txt";
if (!File.Exists(filePath))
{
Assert.Ignore(@"Skipping test {0} since file not found: {1}", methodName, filePath);
}
var rankScorer = new RankScore(filePath);
for (var charge = 1; charge < 4; charge++)
{
var ionTypes = rankScorer.GetIonTypes(charge, 0);
foreach (var ionType in ionTypes)
{
for (var r = 0; r <= ranks; r++)
{
Console.WriteLine("Charge: {0}, Ion Type: {1}, Rank: {2}, Score: {3}",
charge, ionType.Name, r, rankScorer.GetScore(ionType, r, charge, 0.0));
}
}
}
}
private static uint FlushDraw(int[] cards, int[] hole)
{
//各スートの枚数
int[] suitCount = RankScore.CountSuit(cards);
//フラッシュドロー、ナッツフラドロの検査
for (int i = 0; i < suitCount.Length; i++)
{
//フラドロ以上
if (suitCount[i] >= 4)
{
//手札と与えられたカード全体から指定のスートを抽出してカードランクをフラグに変換
uint flag_cards = RankScore.HighCard(cards.Where(id => id / 13 == i).ToArray());
uint flag_hand = RankScore.HighCard(hole.Where(id => id / 13 == i).ToArray());
//繰り上がりで15ビット目が立つならナッツフラドロ
if (flag_cards + flag_hand >= 0x4000)
{
return(NUTS_FLUSH_DRAW);
}
else
{
return(FLUSH_DRAW);
}
}
}
return(NO_DRAW);
}
public ScoredSpectrum(Spectrum spec, RankScore scorer, int charge, double massWithH2O, Tolerance tolerance)
{
_rankedSpec = new RankedSpectrum(spec);
_scorer = scorer;
_charge = charge;
_sequenceMass = massWithH2O;
_tolerance = tolerance;
}
public StudentRow(StudentScore studentScore)
{
RawScoreList = new List <HC.JHSCETakeRecord>();
CourseScoreList = new List <CourseScore>();
CourseIDs = new List <string>();
Scores = new FinalScores();
RankResult = new RankScore(decimal.Zero, null);
StudentScore = studentScore;
}
public InformedBottomUpScorer(LcMsRun run, AminoAcidSet aaSet, int minProductCharge, int maxProductCharge, Tolerance tolerance)
{
Run = run;
AminoAcidSet = aaSet;
MinProductCharge = minProductCharge;
MaxProductCharge = maxProductCharge;
Tolerance = tolerance;
_rankScorer = new RankScore(ActivationMethod.HCD, Ms2DetectorType.Orbitrap, Enzyme.Trypsin, Protocol.Standard);
_scoredSpectra = new Dictionary <int, ScoredSpectrum>();
}
private void RankCheck(ulong lost, List <int[]> holecard, int a, int b, int c)
{
List <int> cards = new List <int>();
cards.Add(holecard[0][0]);
cards.Add(holecard[0][1]);
cards.Add(a);
cards.Add(b);
cards.Add(c);
count++;
switch (RankScore.Score(cards.ToArray()) & 0xF0000000)
{
case RankScore.STFL:
straight_flush++;
return;
case RankScore.QUADS:
quads++;
return;
case RankScore.FULL:
full_house++;
return;
case RankScore.FLUSH:
flush++;
return;
case RankScore.STRAIGHT:
straight++;
return;
case RankScore.THREE:
three_card++;
return;
default:
break;
}
uint draw_flag = DrawOuts.Draw(cards.ToArray(), holecard[0]);
if ((draw_flag & (DrawOuts.FLUSH_DRAW | DrawOuts.NUTS_FLUSH_DRAW)) != 0)
{
flush_draw++;
return;
}
if ((draw_flag & DrawOuts.OPEN_END) != 0)
{
straight_draw_2_open++;
return;
}
if ((draw_flag & DrawOuts.DOUBLE_BELLY) != 0)
{
straight_draw_2_belly++;
return;
}
if ((draw_flag & DrawOuts.GUT_SHOT) != 0)
{
straight_draw_1++;
return;
}
}
private static uint StraightDraw(int[] cards)
{
//ランクごとに存在するかフラグに変換
uint flag = RankScore.HighCard(cards);
{
//オープンエンドとダブルベリー検出用のマスクと終了条件
uint mask, end;
//オープンエンド
mask = 0x1E00;
end = 0x001E;
while (mask >= end)
{
if ((flag & mask) == mask)
{
return(OPEN_END);
}
//右に1ビットシフト
mask = mask >> 1;
}
//ダブルベリー
mask = 0x2E80;
end = 0x005D;
while (mask >= end)
{
if ((flag & mask) == mask)
{
return(DOUBLE_BELLY);
}
//右に1ビットシフト
mask = mask >> 1;
}
}
//A-4,J-A
if ((flag & 0x3C00) == 0x3C00 || (flag & 0x000F) == 0x000F)
{
return(GUT_SHOT);
}
//ガットショット
//マスクと終了条件が3種類存在 {10111,11011,11101}
uint[] masks = { 0x2E00, 0x3600, 0x3A00 };
uint[] ends = { 0x0017, 0x001B, 0x001D };
for (int i = 0; i < masks.Length; i++)
{
//マスクを取得
uint mask = masks[i];
while (mask >= ends[i])
{
if ((flag & mask) == mask)
{
return(GUT_SHOT);
}
//右に1ビットシフト
mask = mask >> 1;
}
}
return(NO_DRAW);
}
