protected override async Task Context()
{
await base.Context();
A.CallTo(() => _jsonSerializer.Serialize(A <QualificationMapping> ._, _qualificationConfiguration.MappingFile))
.Invokes(x => _mapping = x.GetArgument <QualificationMapping>(0));
}
protected override async Task Context()
{
await base.Context();
_expectedOutputPath = Path.Combine(_qualificationConfiguration.OutputFolder, PROJECT_NAME);
DirectoryHelper.DirectoryExists = s => string.Equals(s, _expectedOutputPath);
DirectoryHelper.DeleteDirectory = (s, b) => _deletedDirectory = s;
_simulationName = "S1";
_simulation = new Simulation {
Name = _simulationName
};
_individualSimulation = new IndividualSimulation {
Name = _simulationName
};
_input = new Input {
Project = PROJECT_NAME, Name = _simulationName, SectionId = 2, Type = PKSimBuildingBlockType.Simulation, SectionLevel = 5
};
_expectedSimulationPath = Path.Combine(_expectedOutputPath, _simulationName);
_simulationExport = new SimulationMapping {
Project = PROJECT_NAME, Simulation = _simulationName, Path = _expectedSimulationPath
};
_simulationExports = new[] { _simulationExport };
A.CallTo(() => _exportSimulationRunner.ExportSimulationsIn(_project, A <ExportRunOptions> ._))
.Invokes(x => _exportOptions = x.GetArgument <ExportRunOptions>(1))
.Returns(_simulationExports);
_observedData = DomainHelperForSpecs.ObservedData().WithName("OBS");
_project.AddObservedData(_observedData);
_projectSnapshot.Simulations = new[] { _simulation };
_expectedObservedDataXlsFullPath = Path.Combine(_qualificationConfiguration.ObservedDataFolder, $"{_observedData.Name}{Constants.Filter.XLSX_EXTENSION}");
_expectedObservedDataCsvFullPath = Path.Combine(_qualificationConfiguration.ObservedDataFolder, $"{_observedData.Name}{Constants.Filter.CSV_EXTENSION}");
_expectedInputFullPath = Path.Combine(_qualificationConfiguration.InputsFolder, PROJECT_NAME, PKSimBuildingBlockType.Simulation.ToString(), $"{_simulationName}{CoreConstants.Filter.MARKDOWN_EXTENSION}");
A.CallTo(() => _jsonSerializer.Serialize(A <QualificationMapping> ._, _qualificationConfiguration.MappingFile))
.Invokes(x => _mapping = x.GetArgument <QualificationMapping>(0));
_project.AddBuildingBlock(_individualSimulation);
_qualificationConfiguration.Inputs = new[] { _input };
_qualificationConfiguration.Simulations = new[] { _simulationName, };
_runOptions.Run = true;
}
protected override async Task Context()
{
await base.Context();
var simulation = new Simulation().WithName("Sim");
_curveChart = new CurveChart();
simulation.IndividualAnalyses = new[] { _curveChart };
_simulationPlot = new SimulationPlot
{
SectionId = 2,
Simulation = simulation.Name
};
_projectSnapshot.Simulations = new[] { simulation };
_qualificationConfiguration.SimulationPlots = new[] { _simulationPlot };
A.CallTo(() => _jsonSerializer.Serialize(A <QualificationMapping> ._, _qualificationConfiguration.MappingFile))
.Invokes(x => _mapping = x.GetArgument <QualificationMapping>(0));
}
/// <summary>
/// Update
/// </summary>
/// <param name="contract"></param>
/// <param name="cancellationToken"></param>
public async Task <bool> AddQualification(QualificationContract contract, CancellationToken cancellationToken)
{
var checkQualification = await _dbContext.Qualifications.FirstOrDefaultAsync(x =>
x.CoachId == contract.CoachId && x.ServiceId == contract.ServiceId, cancellationToken);
if (checkQualification != null)
{
_logger.LogInformation($"Qualification with {contract.CoachId} and {contract.ServiceId} is found");
return(false);
}
var tryGetCoach =
await _dbContext.Coaches.FirstOrDefaultAsync(x => x.Id == contract.CoachId, cancellationToken);
var tryGetService =
await _dbContext.Services.FirstOrDefaultAsync(x => x.Id == contract.ServiceId, cancellationToken);
if (tryGetService == null || tryGetCoach == null)
{
_logger.LogInformation($"No Coach with {contract.CoachId} or Service with {contract.ServiceId} id");
return(false);
}
try
{
var qualification = QualificationMapping.QualificationMapFromContractToModel(contract);
await _dbContext.AddAsync(qualification, cancellationToken);
await _dbContext.SaveChangesAsync(cancellationToken);
}
catch
{
_logger.LogInformation($"Qualification with id {contract.Id} is not found");
return(false);
}
return(true);
}
public async Task RunBatchAsync(QualificationRunOptions runOptions)
{
_snapshotProjectCache.Clear();
_logger.AddInfo(runOptions.Validate ? "Starting validation run..." : "Starting qualification run...");
var config = await readConfigurationFrom(runOptions);
if (config == null)
{
throw new QualificationRunException(UnableToLoadQualificationConfigurationFromFile(runOptions.ConfigurationFile));
}
var errorMessage = config.Validate().Message;
if (!string.IsNullOrEmpty(errorMessage))
{
throw new QualificationRunException(errorMessage);
}
_logger.AddDebug($"Loading project from snapshot file '{config.SnapshotFile}'...");
var snapshot = await snapshotProjectFromFile(config.SnapshotFile);
//Ensures that the name of the snapshot is also the name of the project as defined in the configuration
snapshot.Name = config.Project;
_logger.AddDebug($"Project {snapshot.Name} loaded from snapshot file '{config.SnapshotFile}'.");
await performBuildingBlockSwap(snapshot, config.BuildingBlocks);
await performSimulationParameterSwap(snapshot, config.SimulationParameters);
//Retrieve charts and validate inputs before exiting validation to ensure that we can throw error messages if an element is not available
var plots = retrievePlotDefinitionsFrom(snapshot, config);
validateInputs(snapshot, config);
if (runOptions.Validate)
{
_logger.AddInfo($"Validation run terminated for {snapshot.Name}");
return;
}
var begin = DateTime.UtcNow;
var project = await _snapshotTask.LoadProjectFromSnapshot(snapshot);
_workspace.Project = project;
var projectOutputFolder = createProjectOutputFolder(config.OutputFolder, project.Name);
_logger.AddDebug($"Exporting project {project.Name} to '{projectOutputFolder}'", project.Name);
var exportRunOptions = new ExportRunOptions
{
OutputFolder = projectOutputFolder,
ExportMode = SimulationExportMode.Xml | SimulationExportMode.Csv
};
var simulationExports = await _exportSimulationRunner.ExportSimulationsIn(project, exportRunOptions);
var simulationMappings = simulationExports.Select(x => simulationMappingFrom(x, config)).ToArray();
var observedDataMappings = await exportAllObservedData(project, config);
var inputMappings = exportInputs(project, config);
var mapping = new QualificationMapping
{
SimulationMappings = simulationMappings,
ObservedDataMappings = observedDataMappings,
Plots = plots,
Inputs = inputMappings
};
await _jsonSerializer.Serialize(mapping, config.MappingFile);
_logger.AddDebug($"Project mapping for '{project.Name}' exported to '{config.MappingFile}'", project.Name);
var projectFile = Path.Combine(config.TempFolder, $"{project.Name}{CoreConstants.Filter.PROJECT_EXTENSION}");
_workspacePersistor.SaveSession(_workspace, projectFile);
_logger.AddDebug($"Project saved to '{projectFile}'", project.Name);
var snapshotFile = Path.Combine(config.TempFolder, $"{project.Name}{Constants.Filter.JSON_EXTENSION}");
await _snapshotTask.ExportModelToSnapshot(project, snapshotFile);
_logger.AddDebug($"Project snapshot saved to '{snapshotFile}'", project.Name);
var end = DateTime.UtcNow;
var timeSpent = end - begin;
_logger.AddInfo($"Project '{project.Name}' exported for qualification in {timeSpent.ToDisplay()}", project.Name);
}
public async Task RunBatchAsync(QualificationRunOptions runOptions)
{
_snapshotProjectCache.Clear();
_logger.AddInfo(runOptions.Validate ? "Starting validation run..." : "Starting qualification run...");
var config = await readConfigurationFrom(runOptions);
if (config == null)
{
throw new QualificationRunException(UnableToLoadQualificationConfigurationFromFile(runOptions.ConfigurationFile));
}
var errorMessage = config.Validate().Message;
if (!string.IsNullOrEmpty(errorMessage))
{
throw new QualificationRunException(errorMessage);
}
_logger.AddDebug($"Loading project from snapshot file '{config.SnapshotFile}'...", categoryName: config.Project);
var snapshot = await snapshotProjectFromFile(config.SnapshotFile);
//Ensures that the name of the snapshot is also the name of the project as defined in the configuration
snapshot.Name = config.Project;
_logger.AddDebug($"Project {snapshot.Name} loaded from snapshot file '{config.SnapshotFile}'.", categoryName: snapshot.Name);
await performBuildingBlockSwap(snapshot, config.BuildingBlocks);
await performSimulationParameterSwap(snapshot, config.SimulationParameters);
//Retrieve charts and validate inputs before exiting validation to ensure that we can throw error messages if an element is not available
var plots = retrievePlotDefinitionsFrom(snapshot, config);
validateInputs(snapshot, config);
if (runOptions.Validate)
{
_logger.AddInfo($"Validation run terminated for {snapshot.Name}", categoryName: snapshot.Name);
return;
}
var begin = DateTime.UtcNow;
var project = await _snapshotTask.LoadProjectFromSnapshotAsync(snapshot, runOptions.Run);
_workspace.Project = project;
var projectOutputFolder = createProjectOutputFolder(config.OutputFolder, project.Name);
_logger.AddDebug($"Exporting project {project.Name} to '{projectOutputFolder}'", project.Name);
var exportRunOptions = new ExportRunOptions
{
OutputFolder = projectOutputFolder,
//We run the output, this is for the old matlab implementation where we need xml. Otherwise, we only need pkml export
ExportMode = runOptions.Run ? SimulationExportMode.Xml | SimulationExportMode.Csv : SimulationExportMode.Pkml,
Simulations = config.Simulations,
//We only want to export what is required in this case
ExportAllSimulationsIfListIsEmpty = false
};
//Using absolute path for simulation folder. We need them to be relative
var simulationMappings = await _exportSimulationRunner.ExportSimulationsIn(project, exportRunOptions);
simulationMappings.Each(x => x.Path = relativePath(x.Path, config.OutputFolder));
var observedDataMappings = await exportAllObservedData(project, config);
var inputMappings = exportInputs(project, config);
var mapping = new QualificationMapping
{
SimulationMappings = simulationMappings,
ObservedDataMappings = observedDataMappings,
Plots = plots,
Inputs = inputMappings
};
await _jsonSerializer.Serialize(mapping, config.MappingFile);
_logger.AddDebug($"Project mapping for '{project.Name}' exported to '{config.MappingFile}'", project.Name);
if (runOptions.ExportProjectFiles)
{
var projectFile = Path.Combine(config.TempFolder, $"{project.Name}{CoreConstants.Filter.PROJECT_EXTENSION}");
_workspacePersistor.SaveSession(_workspace, projectFile);
_logger.AddDebug($"Project saved to '{projectFile}'", project.Name);
var snapshotFile = Path.Combine(config.TempFolder, $"{project.Name}{Constants.Filter.JSON_EXTENSION}");
await _snapshotTask.ExportModelToSnapshotAsync(project, snapshotFile);
_logger.AddDebug($"Project snapshot saved to '{snapshotFile}'", project.Name);
}
var end = DateTime.UtcNow;
var timeSpent = end - begin;
_logger.AddInfo($"Project '{project.Name}' exported for qualification in {timeSpent.ToDisplay()}", project.Name);
}
