public static List <SearchResult> ReadSearchResultsViaBiblioSpec(String filename, Func <int, bool> progressMonitor)
{
string tempFile = null;
try
{
tempFile = Path.GetTempFileName();
var blibBuild = new BlibBuild(tempFile, new[] { filename })
{
CompressLevel = 0,
};
var status = new ProgressStatus("");
var progressMonitorImpl = ProgressMonitorImpl.NewProgressMonitorImpl(status, progressMonitor);
string[] ambiguousPeptides;
blibBuild.BuildLibrary(LibraryBuildAction.Create, progressMonitorImpl, ref status, out ambiguousPeptides);
return(ReadBiblioSpecDatabase(tempFile, progressMonitor));
}
finally
{
try
{
if (tempFile != null)
{
File.Delete(tempFile);
}
}
catch (Exception exception)
{
Trace.TraceWarning("Exception deleting temp file {0}", exception);
}
}
}
public override bool RunLongJob(Control owner, Action <IProgressMonitor> job)
{
using (var longWaitDialog = new LongWaitDialog(owner.TopLevelControl, Program.AppName))
{
var longOperationBroker =
new LongOperationBroker(
broker =>
job.Invoke(ProgressMonitorImpl.NewProgressMonitorImpl(new ProgressStatus("Working"),
iProgress =>
{
try
{
broker.
UpdateStatusMessage(
iProgress + "% complete");
return(true);
}
catch (JobCancelledException)
{
return(false);
}
})), longWaitDialog);
longOperationBroker.LaunchJob();
return(!longOperationBroker.WasCancelled);
}
}
