private static void Process(GrowablePeak gpeak, BinaryWriter writer, ICollection <double> centerMasses,
ICollection <float> centerMassErrs, ICollection <float> intensities,
ICollection <float> minTimes, ICollection <float> maxTimes,
ICollection <long> filePos, int minPeaks, IRawFile rawFile, double valleyFactor,
bool split, IPeakCollector collector, bool maxIntensity)
{
Peak peak = gpeak.ToPeak();
if (peak.Count >= minPeaks)
{
peak.RemoveDoublePeaks(rawFile, maxIntensity);
if (peak.Count >= minPeaks)
{
peak.Smooth(maxIntensity);
if (collector != null)
{
collector.AddPeak(peak);
}
Peak[] peaks = peak.Decompose(valleyFactor, split, maxIntensity);
foreach (Peak p in peaks)
{
if (p.Count >= minPeaks)
{
centerMasses.Add(p.CenterMass);
centerMassErrs.Add(p.CenterMassError);
intensities.Add(p.Intensity);
minTimes.Add(p.GetMinTime(rawFile));
maxTimes.Add(p.GetMaxTime(rawFile));
filePos.Add(writer.BaseStream.Position);
p.Write(writer);
}
p.Dispose();
}
}
}
}
