protected override void Context()
{
base.Context();
_project = new MoBiProject();
var molecule = new MoleculeBuilder().WithName(_moleculeName);
var moleculeParameter = new Parameter().WithName(_moleculeParameterName);
molecule.Add(moleculeParameter);
var molecules = new MoleculeBuildingBlock()
{
molecule
};
_project.AddBuildingBlock(molecules);
var parameter = new Parameter().WithName(_parameterName);
var root = new Container().WithName("Root");
root.Add(parameter);
var spatialStructure = new MoBiSpatialStructure().WithTopContainer(root);
_project.AddBuildingBlock(spatialStructure);
var reactionBuilder = new ReactionBuilder().WithName(_reactionName);
var reactions = new MoBiReactionBuildingBlock()
{
reactionBuilder
};
_project.AddBuildingBlock(reactions);
A.CallTo(() => _context.CurrentProject).Returns(_project);
}
protected override void Context()
{
base.Context();
_buildConfiguration = A.Fake <IMoBiBuildConfiguration>();
_psvInfo = new ParameterStartValuesBuildingBlockInfo {
UntypedBuildingBlock = new ParameterStartValuesBuildingBlock().WithId("psvbb1")
};
_templateMoleculeBuildingBlock = new MoleculeBuildingBlock {
Id = "templateMoleculeBuildingBlock"
};
_templateSpatialStructure = new MoBiSpatialStructure()
{
Id = "templateSpatialStructure"
};
_moleculesInfo = new MoleculesInfo {
UntypedBuildingBlock = _templateMoleculeBuildingBlock
};
_spatialStructureInfo = new SpatialStructureInfo {
UntypedBuildingBlock = _templateSpatialStructure
};
_buildConfiguration.ParameterStartValuesInfo = _psvInfo;
_buildConfiguration.SpatialStructureInfo = _spatialStructureInfo;
_buildConfiguration.MoleculesInfo = _moleculesInfo;
A.CallTo(() => _buildConfiguration.AllBuildingBlockInfos()).Returns(new IBuildingBlockInfo[] { _psvInfo, _moleculesInfo, _spatialStructureInfo });
_cloneBuildingBlock = new ParameterStartValuesBuildingBlock().WithId("psvbb2");
A.CallTo(() => _cloneManager.CloneBuidingBlock(_psvInfo.BuildingBlock)).Returns(_cloneBuildingBlock);
A.CallTo(() => _simulation.MoBiBuildConfiguration).Returns(_buildConfiguration);
A.CallTo(_nameCorrector).WithReturnType <bool>().Returns(true);
}
protected override void Context()
{
base.Context();
_project = new MoBiProject();
var molecule = new MoleculeBuilder().WithName(_moleculeName);
var moleculeParameter = new Parameter().WithName(_moleculeParameterName);
molecule.Add(moleculeParameter);
var molecules = new MoleculeBuildingBlock()
{
molecule
};
_project.AddBuildingBlock(molecules);
var parameter = new Parameter().WithName(_parameterName);
var root = new Container().WithName(_topContainerName);
root.Add(parameter);
var spatialStructure = new MoBiSpatialStructure().WithTopContainer(root);
spatialStructure.GlobalMoleculeDependentProperties = new Container().WithName(Constants.MOLECULE_PROPERTIES);
spatialStructure.NeighborhoodsContainer = new Container().WithName(Constants.NEIGHBORHOODS);
_project.AddBuildingBlock(spatialStructure);
var reactionBuilder = new ReactionBuilder().WithName(_reactionName);
var reactions = new MoBiReactionBuildingBlock()
{
reactionBuilder
};
_project.AddBuildingBlock(reactions);
_project.AddSimulation(new MoBiSimulation().WithName(_simulationName));
var eventGroupBuilder = new EventGroupBuilder().WithName(_eventGroupName);
var eventGroupBuildingBlock = new EventGroupBuildingBlock();
eventGroupBuildingBlock.Add(eventGroupBuilder);
_project.AddBuildingBlock(eventGroupBuildingBlock);
A.CallTo(() => _context.CurrentProject).Returns(_project);
}
