public void test_UnitDefinition_parent_create()
{
Model m = new Model(2, 4);
UnitDefinition ud = m.createUnitDefinition();
ListOf lo = m.getListOfUnitDefinitions();
assertTrue(lo == m.getUnitDefinition(0).getParentSBMLObject());
assertTrue(lo == ud.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_CompartmentType_parent_create()
{
Model m = new Model(2, 4);
CompartmentType ct = m.createCompartmentType();
ListOf lo = m.getListOfCompartmentTypes();
assertTrue(lo == m.getCompartmentType(0).getParentSBMLObject());
assertTrue(lo == ct.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_SpeciesReference_Reactant_parent_create()
{
Reaction r = new Reaction(2, 4);
SpeciesReference sr = r.createReactant();
ListOf lo = r.getListOfReactants();
assertTrue(lo == r.getReactant(0).getParentSBMLObject());
assertTrue(lo == sr.getParentSBMLObject());
assertTrue(r == lo.getParentSBMLObject());
}
public void test_Reaction_parent_create()
{
Model m = new Model(2, 4);
Reaction r = m.createReaction();
ListOf lo = m.getListOfReactions();
assertTrue(lo == m.getReaction(0).getParentSBMLObject());
assertTrue(lo == r.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_RateRule_parent_create()
{
Model m = new Model(2, 4);
RateRule r = m.createRateRule();
ListOf lo = m.getListOfRules();
assertTrue(lo == m.getRule(0).getParentSBMLObject());
assertTrue(lo == r.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_SpeciesReference_Modifier_parent_create()
{
Reaction r = new Reaction(2, 4);
ModifierSpeciesReference sr = r.createModifier();
ListOf lo = r.getListOfModifiers();
assertTrue(lo == sr.getParentSBMLObject());
assertTrue(lo == r.getModifier(0).getParentSBMLObject());
assertTrue(r == lo.getParentSBMLObject());
}
public void test_Parameter_parent_create()
{
Model m = new Model(2, 4);
Parameter p = m.createParameter();
ListOf lo = m.getListOfParameters();
assertTrue(lo == m.getParameter(0).getParentSBMLObject());
assertTrue(lo == p.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_InitialAssignment_parent_create()
{
Model m = new Model(2, 4);
InitialAssignment ia = m.createInitialAssignment();
ListOf lo = m.getListOfInitialAssignments();
assertTrue(lo == m.getInitialAssignment(0).getParentSBMLObject());
assertTrue(lo == ia.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_FunctionDefinition_parent_create()
{
Model m = new Model(2, 4);
FunctionDefinition fd = m.createFunctionDefinition();
ListOf lo = m.getListOfFunctionDefinitions();
assertTrue(lo == m.getFunctionDefinition(0).getParentSBMLObject());
assertTrue(lo == fd.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_Event_parent_create()
{
Model m = new Model(2, 4);
Event e = m.createEvent();
ListOf lo = m.getListOfEvents();
assertTrue(lo == m.getEvent(0).getParentSBMLObject());
assertTrue(lo == e.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_EventAssignment_parent_create()
{
Event e = new Event(2, 4);
EventAssignment ea = e.createEventAssignment();
ListOf lo = e.getListOfEventAssignments();
assertTrue(lo == e.getEventAssignment(0).getParentSBMLObject());
assertTrue(lo == ea.getParentSBMLObject());
assertTrue(e == lo.getParentSBMLObject());
}
public void test_Species_parent_create()
{
Model m = new Model(2, 4);
Species s = m.createSpecies();
ListOf lo = m.getListOfSpecies();
assertTrue(lo == s.getParentSBMLObject());
assertTrue(lo == m.getSpecies(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_Constraint_parent_create()
{
Model m = new Model(2, 4);
Constraint ct = m.createConstraint();
ListOf lo = m.getListOfConstraints();
assertTrue(lo == m.getConstraint(0).getParentSBMLObject());
assertTrue(lo == ct.getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_SpeciesReference_Product_parent_create_model()
{
Model m = new Model(2, 4);
Reaction r = m.createReaction();
SpeciesReference sr = m.createProduct();
ListOf lo = r.getListOfProducts();
assertTrue(lo == r.getProduct(0).getParentSBMLObject());
assertTrue(lo == sr.getParentSBMLObject());
assertTrue(r == lo.getParentSBMLObject());
}
public void test_Reaction_parent_add()
{
Reaction ia = new Reaction(2, 4);
Model m = new Model(2, 4);
ia.setId("k");
m.addReaction(ia);
ia = null;
ListOf lo = m.getListOfReactions();
assertTrue(lo == m.getReaction(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_CompartmentType_parent_add()
{
CompartmentType ct = new CompartmentType(2, 4);
Model m = new Model(2, 4);
ct.setId("ct");
m.addCompartmentType(ct);
ct = null;
ListOf lo = m.getListOfCompartmentTypes();
assertTrue(lo == m.getCompartmentType(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_Parameter_parent_add()
{
Parameter ia = new Parameter(2, 4);
Model m = new Model(2, 4);
ia.setId("p");
m.addParameter(ia);
ia = null;
ListOf lo = m.getListOfParameters();
assertTrue(lo == m.getParameter(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_Constraint_parent_add()
{
Constraint ct = new Constraint(2, 4);
Model m = new Model(2, 4);
ct.setMath(libsbml.parseFormula("a-k"));
m.addConstraint(ct);
ct = null;
ListOf lo = m.getListOfConstraints();
assertTrue(lo == m.getConstraint(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_Unit_parent_create()
{
UnitDefinition ud = new UnitDefinition(2, 4);
Unit u = ud.createUnit();
assertTrue(ud.getNumUnits() == 1);
ListOf lo = ud.getListOfUnits();
assertTrue(lo == ud.getUnit(0).getParentSBMLObject());
assertTrue(lo == u.getParentSBMLObject());
assertTrue(ud == lo.getParentSBMLObject());
ud = null;
}
public void test_SpeciesReference_Reactant_parent_add()
{
SpeciesReference sr = new SpeciesReference(2, 4);
Reaction r = new Reaction(2, 4);
sr.setSpecies("s");
r.addReactant(sr);
sr = null;
ListOf lo = r.getListOfReactants();
assertTrue(lo == r.getReactant(0).getParentSBMLObject());
assertTrue(r == lo.getParentSBMLObject());
}
public void test_Compartment_parent_add()
{
Compartment c = new Compartment(2, 4);
c.setId("c");
Model m = new Model(2, 4);
m.addCompartment(c);
c = null;
ListOf lo = m.getListOfCompartments();
assertTrue(lo == m.getCompartment(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_UnitDefinition_parent_add()
{
UnitDefinition ia = new UnitDefinition(2, 4);
Model m = new Model(2, 4);
ia.setId("u");
ia.createUnit();
m.addUnitDefinition(ia);
ia = null;
ListOf lo = m.getListOfUnitDefinitions();
assertTrue(lo == m.getUnitDefinition(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_EventAssignment_parent_add()
{
Event e = new Event(2, 4);
EventAssignment ea = new EventAssignment(2, 4);
ea.setVariable("c");
ea.setMath(libsbml.parseFormula("K+L"));
e.addEventAssignment(ea);
ea = null;
ListOf lo = e.getListOfEventAssignments();
assertTrue(lo == e.getEventAssignment(0).getParentSBMLObject());
assertTrue(e == lo.getParentSBMLObject());
}
public void test_SpeciesType_parent_add()
{
SpeciesType ia = new SpeciesType(2, 4);
ia.setId("s");
Model m = new Model(2, 4);
m.addSpeciesType(ia);
ia = null;
ListOf lo = m.getListOfSpeciesTypes();
assertTrue(lo == m.getSpeciesType(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_FunctionDefinition_parent_add()
{
FunctionDefinition fd = new FunctionDefinition(2, 4);
Model m = new Model(2, 4);
fd.setId("fd");
fd.setMath(libsbml.parseFormula("l"));
m.addFunctionDefinition(fd);
fd = null;
ListOf lo = m.getListOfFunctionDefinitions();
assertTrue(lo == m.getFunctionDefinition(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_InitialAssignment_parent_add()
{
InitialAssignment ia = new InitialAssignment(2, 4);
Model m = new Model(2, 4);
ia.setSymbol("c");
ia.setMath(libsbml.parseFormula("9"));
m.addInitialAssignment(ia);
ia = null;
ListOf lo = m.getListOfInitialAssignments();
assertTrue(lo == m.getInitialAssignment(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_SpeciesReference_Modifier_parent_add()
{
ModifierSpeciesReference sr = new ModifierSpeciesReference(2, 4);
sr.setSpecies("s");
Reaction r = new Reaction(2, 4);
r.addModifier(sr);
sr = null;
ListOf lo = r.getListOfModifiers();
assertTrue(lo == r.getModifier(0).getParentSBMLObject());
assertTrue(r == lo.getParentSBMLObject());
}
public void test_Unit_parent_add()
{
UnitDefinition ud = new UnitDefinition(2, 4);
Unit u = new Unit(2, 4);
u.setKind(libsbml.UNIT_KIND_MOLE);
ud.addUnit(u);
u = null;
assertTrue(ud.getNumUnits() == 1);
ListOf lo = ud.getListOfUnits();
assertTrue(lo == ud.getUnit(0).getParentSBMLObject());
assertTrue(ud == lo.getParentSBMLObject());
ud = null;
}
public void test_Rule_parent_add()
{
Rule ia = new RateRule(2, 4);
ia.setVariable("a");
ia.setMath(libsbml.parseFormula("9"));
Model m = new Model(2, 4);
m.addRule(ia);
ia = null;
ListOf lo = m.getListOfRules();
assertTrue(lo == m.getRule(0).getParentSBMLObject());
assertTrue(m == lo.getParentSBMLObject());
}
public void test_ListOf_copyConstructor()
{
ListOf o1 = new ListOf(2, 1);
Species s = new Species(2, 1);
s.setId("species_1");
o1.append(s);
s = null;
ListOf o2 = new ListOf(o1);
assertTrue(o2.size() == 1);
assertTrue(((Species)o2.get(0)).getId() == "species_1");
assertTrue(o2.getParentSBMLObject() == o1.getParentSBMLObject());
o2 = null;
o1 = null;
}