private void TestWizardExcludeSpectrumSourceFiles()
{
// Open the empty .sky file (has no peptides)
PrepareDocument("ImportPeptideSearch-Exclude.sky");
// Launch the wizard
var importPeptideSearchDlg = ShowDialog <ImportPeptideSearchDlg>(SkylineWindow.ShowImportPeptideSearchDlg);
// We should be on the "Build Spectral Library" page of the wizard.
SrmDocument doc = SkylineWindow.Document;
RunUI(() =>
{
Assert.IsTrue(importPeptideSearchDlg.CurrentPage == ImportPeptideSearchDlg.Pages.spectra_page);
importPeptideSearchDlg.BuildPepSearchLibControl.AddSearchFiles(new[] { GetTestPath("SpectrumSources.blib") });
Assert.IsTrue(importPeptideSearchDlg.ClickNextButton());
});
WaitForDocumentChange(doc);
RunUI(() =>
{
Assert.IsTrue(importPeptideSearchDlg.CurrentPage == ImportPeptideSearchDlg.Pages.chromatograms_page);
ImportResultsControl importResultsControl = importPeptideSearchDlg.ImportResultsControl as ImportResultsControl;
Assert.IsNotNull(importResultsControl);
// Exclude spectrum source files is unchecked, so the control should match
// the two spectrum source files that match exactly: modless.mzXML and mods.mzXML
List <ImportPeptideSearch.FoundResultsFile> foundResults = importResultsControl.FoundResultsFiles;
string[] missingResults = importResultsControl.MissingResultsFiles.ToArray();
Assert.AreEqual(2, foundResults.Count);
Assert.AreEqual("modless", foundResults[0].Name);
Assert.AreEqual("modless.mzXML", Path.GetFileName(foundResults[0].Path));
Assert.AreEqual("mods", foundResults[1].Name);
Assert.AreEqual("mods.mzXML", Path.GetFileName(foundResults[1].Path));
Assert.IsFalse(importResultsControl.ResultsFilesMissing);
Assert.AreEqual(0, missingResults.Count());
// Check exclude spectrum source files
Assert.IsTrue(importResultsControl.ExcluedSpectrumSourceFilesVisible);
importResultsControl.ExcludeSpectrumSourceFiles = true;
// The test files directory contains modless.raw, but no file with the same
// filestem as mods.mzXML, so the control should match just modless.raw
foundResults = importResultsControl.FoundResultsFiles;
missingResults = importResultsControl.MissingResultsFiles.ToArray();
Assert.AreEqual(1, foundResults.Count);
Assert.AreEqual("modless", foundResults[0].Name);
Assert.AreEqual("modless.raw", Path.GetFileName(foundResults[0].Path));
Assert.IsTrue(importResultsControl.ResultsFilesMissing);
Assert.AreEqual(1, missingResults.Count());
Assert.AreEqual("mods.mzXML", Path.GetFileName(missingResults[0]));
importPeptideSearchDlg.ClickCancelButton();
});
WaitForClosedForm(importPeptideSearchDlg);
RunUI(() => SkylineWindow.SaveDocument());
}
/// <summary>
/// A quick unit test for the name->path name uniqueness enforcement code.
/// </summary>
private void TestUniqueness()
{
const string PREFIX = "prefix1";
var names = new[] { PREFIX + "a", PREFIX + "b", PREFIX };
Assert.AreEqual(PREFIX, ImportResultsDlg.GetCommonPrefix(names)); // Check common prefix code while we're at it
var list = new List <ImportPeptideSearch.FoundResultsFile>
{
new ImportPeptideSearch.FoundResultsFile(PREFIX + "a", "path1"),
new ImportPeptideSearch.FoundResultsFile(PREFIX + "b", "path2"),
new ImportPeptideSearch.FoundResultsFile(PREFIX + "a", "path3")
};
var result = ImportResultsControl.EnsureUniqueNames(list);
Assert.AreEqual(list[0].Name, result[0].Name);
Assert.AreEqual(list[1].Name, result[1].Name);
Assert.AreEqual(list[2].Name + "2", result[2].Name);
}
