/// <summary>
/// Writes a single data element to the formatter.
/// </summary>
/// <param name="formatter">Formatter</param>
/// <param name="data">Tree Data</param>
public static void Format(this IPhylogeneticTreeFormatter formatter, Tree data)
{
var fs = ParserFormatterExtensions <IPhylogeneticTreeFormatter> .GetOpenStream(formatter, true);
if (fs != null)
{
formatter.Format(fs, data);
}
else
{
throw new Exception("You must open a formatter before calling Write.");
}
}
/// <summary>
/// Writes a single sequence to the formatter.
/// </summary>
/// <param name="formatter">Formatter</param>
/// <param name="data">Tree data</param>
/// <param name="filename">Filename</param>
public static void Format(this IPhylogeneticTreeFormatter formatter, Tree data, string filename)
{
if (formatter == null)
{
throw new ArgumentNullException("formatter");
}
if (data == null)
{
throw new ArgumentNullException("data");
}
if (string.IsNullOrWhiteSpace(filename))
{
throw new ArgumentNullException("filename");
}
using (var fs = File.Create(filename))
formatter.Format(fs, data);
}
/// <summary>
/// Formats the Phylogenetic tree to a string.
/// </summary>
/// <param name="formatter">Sequence formatter</param>
/// <param name="tree">Tree data</param>
/// <returns></returns>
public static string FormatString(this IPhylogeneticTreeFormatter formatter, Tree tree)
{
return(DoFormat(formatter.Format, tree));
}
/// <summary>
/// Closes the formatter.
/// </summary>
/// <param name="formatter">Formatter.</param>
public static void Close(this IPhylogeneticTreeFormatter formatter)
{
ParserFormatterExtensions <IPhylogeneticTreeFormatter> .Close(formatter);
}
/// <summary>
/// Open a file and parse it with the formatter.
/// </summary>
/// <param name="formatter">Formatter</param>
/// <param name="filename">Filename</param>
/// <returns>IDisposable to close stream.</returns>
public static IDisposable Open(this IPhylogeneticTreeFormatter formatter, string filename)
{
return(ParserFormatterExtensions <IPhylogeneticTreeFormatter> .Open(formatter, filename));
}
