protected override void Context()
{
base.Context();
_project = A.Fake <IMoBiProject>();
_objectBaseRepository = A.Fake <IWithIdRepository>();
_spatialStructure = A.Fake <IMoBiSpatialStructure>();
_simulationSettings = A.Fake <ISimulationSettings>();
_moBiReactionBuildingBlock = A.Fake <IMoBiReactionBuildingBlock>();
_moleculeBuildingBlock = A.Fake <IMoleculeBuildingBlock>();
A.CallTo(() => _context.CurrentProject).Returns(_project);
A.CallTo(() => _context.Create <IMoleculeBuildingBlock>()).Returns(_moleculeBuildingBlock);
A.CallTo(() => _context.Create <IMoBiReactionBuildingBlock>()).Returns(_moBiReactionBuildingBlock);
A.CallTo(() => _spatialStructureFactory.CreateDefault(AppConstants.DefaultNames.SpatialStructure)).Returns(_spatialStructure);
A.CallTo(() => _simulationSettingsFactory.CreateDefault()).Returns(_simulationSettings);
_topContainer = A.Fake <IContainer>();
A.CallTo(() => _context.Create <IContainer>()).Returns(_topContainer);
_passiveTransportBuildingBlock = A.Fake <IPassiveTransportBuildingBlock>();
A.CallTo(() => _context.Create <IPassiveTransportBuildingBlock>()).Returns(_passiveTransportBuildingBlock);
_observerBuildingBlock = A.Fake <IObserverBuildingBlock>();
A.CallTo(() => _context.Create <IObserverBuildingBlock>()).Returns(_observerBuildingBlock);
_eventGroupBuildingBlock = A.Fake <IEventGroupBuildingBlock>();
A.CallTo(() => _context.Create <IEventGroupBuildingBlock>()).Returns(_eventGroupBuildingBlock);
A.CallTo(() => _context.ObjectRepository).Returns(_objectBaseRepository);
}
public void Visit(IPassiveTransportBuildingBlock passiveTransportBuildingBlock)
{
convert(passiveTransportBuildingBlock);
_converted = true;
}
protected override void Because()
{
base.Because();
_ptBuildingBlock = _moBiProject.PassiveTransportCollection.FirstOrDefault();
}
private void convert(IMoleculeBuilder moleculeBuilder, IMoleculeBuildingBlock moleculeBuildingBlock, IPassiveTransportBuildingBlock passiveTransportBuildingBlock)
{
convert(moleculeBuilder, moleculeBuildingBlock, new[] { passiveTransportBuildingBlock });
}
public void Visit(IPassiveTransportBuildingBlock objToVisit)
{
retrieveTask(objToVisit);
}
public override void GlobalContext()
{
base.GlobalContext();
_passiveTransportBuildingBlock = LoadPKML <IPassiveTransportBuildingBlock>("Passive Transports");
}
protected override void Because()
{
_passiveTransports = sut.AllPassiveTransportsFor(_simulation);
}
protected override void Context()
{
base.Context();
_returnedBuildingBlocks = new List <IBuildingBlock>();
_childReactionBuilder = new ReactionBuilder().WithName("Test").WithId("FindME");
_reactionBuildingBlock = new MoBiReactionBuildingBlock()
{
_childReactionBuilder
};
_allBuildingBlocks.Add(_reactionBuildingBlock);
_moleculeBuilder = new MoleculeBuilder();
_moleculeBuildingBlock = new MoleculeBuildingBlock()
{
_moleculeBuilder
};
_allBuildingBlocks.Add(_moleculeBuildingBlock);
_obseverBuilder = new ObserverBuilder();
_observerBuildingBlock = new ObserverBuildingBlock()
{
_obseverBuilder
};
_allBuildingBlocks.Add(_observerBuildingBlock);
_passiveTranportBuilder = new TransportBuilder();
_passiveTranportBuildingBlock = new PassiveTransportBuildingBlock()
{
_passiveTranportBuilder
};
_allBuildingBlocks.Add(_passiveTranportBuildingBlock);
_applicationBuilder = new ApplicationBuilder();
_eventGroupBuildingBlock = new EventGroupBuildingBlock()
{
_applicationBuilder
};
_allBuildingBlocks.Add(_eventGroupBuildingBlock);
_parameter = new Parameter().WithName("Para");
var container = new Container().WithName("Cont");
container.Add(_parameter);
_objectBaseFactory = A.Fake <IObjectBaseFactory>();
_parmaeterFactory = A.Fake <IParameterFactory>();
A.CallTo(() => _objectBaseFactory.Create <IContainer>()).Returns(A.Fake <IContainer>());
A.CallTo(() => _objectBaseFactory.Create <IMoBiSpatialStructure>()).Returns(new MoBiSpatialStructure());
var diagramManagerFactory = A.Fake <IDiagramManagerFactory>();
_spatialStructure = new MoBiSpatialStructureFactory(_objectBaseFactory, _parmaeterFactory, A.Fake <IconRepository>(), diagramManagerFactory).Create().DowncastTo <IMoBiSpatialStructure>();
_spatialStructure.AddTopContainer(container);
_allBuildingBlocks.Add(_spatialStructure);
_formula = new ExplicitFormula();
_moleculeBuildingBlock.AddFormula(_formula);
_parameterStartValue = new ParameterStartValue {
Path = new ObjectPath {
"test"
}, StartValue = 1, Dimension = A.Fake <IDimension>()
};
_parameterStartValueBuildingBlock = new ParameterStartValuesBuildingBlock()
{
_parameterStartValue
};
_allBuildingBlocks.Add(_parameterStartValueBuildingBlock);
_moleculeStartValue = new MoleculeStartValue {
ContainerPath = new ObjectPath {
"test"
}, Name = "drug"
};
_moleculeStartValuesBuildingBlock = new MoleculeStartValuesBuildingBlock()
{
_moleculeStartValue
};
_allBuildingBlocks.Add(_moleculeStartValuesBuildingBlock);
}
public void Visit(IPassiveTransportBuildingBlock passiveTransportBuildingBlock)
{
ConvertAllParametersIn(passiveTransportBuildingBlock);
}
public void Visit(IPassiveTransportBuildingBlock passiveTransportBuildingBlock)
{
_found = passiveTransportBuildingBlock.Contains(_entity);
}
public void Visit(IPassiveTransportBuildingBlock passiveTransportBuilding)
{
convertFormulaReferencingAeffIn(passiveTransportBuilding);
}