/// <summary>
/// Adds all reactionBuilders to the Reaction Building Block and adds the Reaction Building
/// Block to the MoBi Project.
/// </summary>
public override void AddToProject()
{
foreach (var reaction in ReactionBuilderList)
{
_reactionBuildingBlock.Add(reaction);
}
foreach (var passiveTransport in _passiveTransportList)
{
_passiveTransportBuildingBlock.Add(passiveTransport);
}
_context.AddToHistory(new AddBuildingBlockCommand <IMoBiReactionBuildingBlock>(_reactionBuildingBlock).Run(_context));
_context.AddToHistory(new AddBuildingBlockCommand <IPassiveTransportBuildingBlock>(_passiveTransportBuildingBlock).Run(_context));
}
protected override void Context()
{
_buildConfiguration = new MoBiBuildConfiguration();
_moleculeBuidingBlock = new MoleculeBuildingBlock().WithName("M");
_buildConfiguration.Molecules = _moleculeBuidingBlock;
_reactionBuildingBlock = new MoBiReactionBuildingBlock().WithName("R");
_reactionBuildingBlock.Add(new ReactionBuilder().WithName("R1"));
_buildConfiguration.Reactions = _reactionBuildingBlock;
_passiveTransportBuildingBlock = new PassiveTransportBuildingBlock().WithName("PT");
_passiveTransportBuildingBlock.Add(new TransportBuilder().WithName("PT2"));
_passiveTransportBuildingBlock.Add(new TransportBuilder().WithName("PT1"));
_buildConfiguration.PassiveTransports = _passiveTransportBuildingBlock;
_eventGroupBuildingBlock = new EventGroupBuildingBlock().WithName("EG");
_buildConfiguration.EventGroups = _eventGroupBuildingBlock;
_msvBuildingBlock = new MoleculeStartValuesBuildingBlock().WithName("MSV");
_buildConfiguration.MoleculeStartValues = _msvBuildingBlock;
_psvBuildingBlock = new ParameterStartValuesBuildingBlock().WithName("PSV");
_buildConfiguration.ParameterStartValues = _psvBuildingBlock;
_spatialStructure = new MoBiSpatialStructure().WithName("SPST");
_buildConfiguration.SpatialStructure = _spatialStructure;
_observerBuildingBlock = new ObserverBuildingBlock().WithName("O");
_buildConfiguration.Observers = _observerBuildingBlock;
_objectPathFactory = new ObjectPathFactory(new AliasCreator());
_entityPathResolver = new EntityPathResolver(_objectPathFactory);
sut = new AffectedBuildingBlockRetriever(_entityPathResolver);
//common setup
_simulation = new MoBiSimulation {
BuildConfiguration = _buildConfiguration
};
}
protected override void Context()
{
base.Context();
_reactionBuildingBlock = new MoBiReactionBuildingBlock
{
DiagramModel = new DiagramModel(),
DiagramManager = new MoBiReactionDiagramManager()
};
_moBiReactionDiagramManager = _reactionBuildingBlock.DiagramManager.DowncastTo <IReactionDiagramManager <IMoBiReactionBuildingBlock> >();
_moBiReactionDiagramManager.InitializeWith(_reactionBuildingBlock, A.Fake <IDiagramOptions>());
_molecule = new MoleculeBuilder().WithId("moleculeId").WithName("moleculeName");
_reaction = new ReactionBuilder().WithId("reactionId");
_reaction.AddEduct(new ReactionPartnerBuilder(_molecule.Name, 1.0));
_reactionBuildingBlock.Add(_reaction);
_moBiReactionDiagramManager.AddObjectBase(_reaction);
_moBiReactionDiagramManager.AddMolecule(_reaction, "moleculeName");
_moleculeNode = _moBiReactionDiagramManager.GetMoleculeNodes("moleculeName").FirstOrDefault();
_reactionNode = _moBiReactionDiagramManager.PkModel.DiagramModel.GetAllChildren <ReactionNode>().FirstOrDefault();
_interactionTask = A.Fake <IInteractionTasksForChildren <IMoBiReactionBuildingBlock, IReactionBuilder> >();
_activeSubjectRetriever = A.Fake <IActiveSubjectRetriever>();
var reactionLink = new ReactionLink();
reactionLink.Initialize(ReactionLinkType.Educt, _reactionNode, _moleculeNode);
sut.Edit(_reactionBuildingBlock);
var removeReactionCommand = new RemoveCommandFor <IMoBiReactionBuildingBlock, IReactionBuilder>(_interactionTask, _moBiContext, _activeSubjectRetriever);
A.CallTo(() => _moBiContext.Get <IReactionBuilder>(_reaction.Id)).Returns(_reaction);
A.CallTo(() => _moBiContext.Resolve <RemoveCommandFor <IMoBiReactionBuildingBlock, IReactionBuilder> >()).Returns(removeReactionCommand);
A.CallTo(() => _activeSubjectRetriever.Active <IBuildingBlock>()).Returns(_reactionBuildingBlock);
A.CallTo(() => _interactionTask.Remove(_reaction, _reactionBuildingBlock, _reactionBuildingBlock, A <bool> ._)).Invokes(x => _reactionBuildingBlock.Remove(_reaction));
}