// complement and update ViewModel from PkModel and couple ViewModel and PkModel
protected override void UpdateDiagramModel(IMoBiSimulation simulation, IDiagramModel diagramModel, bool coupleAll)
{
// create neighborhoodsContainerNode, because entities are only added
// for available parentContainerNodes
IContainerNode neighborhoodsContainerNode = AddAndCoupleNode <IContainer, MultiPortContainerNode>(diagramModel, simulation.Model.Neighborhoods, coupleAll);
foreach (var baseNode in neighborhoodsContainerNode.GetAllChildren <IBaseNode>())
{
baseNode.IsVisible = false;
}
neighborhoodsContainerNode.IsVisible = false;
foreach (var topContainer in simulation.Model.Root.GetAllContainersAndSelf <IContainer>())
{
if (topContainer.ContainerType == ContainerType.Organism ||
topContainer.ContainerType == ContainerType.Organ ||
topContainer.ContainerType == ContainerType.Compartment)
{
AddObjectBase(diagramModel, topContainer, true, coupleAll);
}
}
foreach (var neighborhood in simulation.Model.Neighborhoods.GetAllChildren <INeighborhood>())
{
AddNeighborhood(neighborhood);
}
DiagramModel.ClearUndoStack();
}