/// <summary>
/// Constructor of a County occurrece map object. Make sure that the static methos InitializeMap is called before using this constructor.
/// </summary>
/// <param name="userContext">
/// The user Context.
/// </param>
/// <param name="taxon">
/// A taxon object
/// </param>
public CountyOccurrenceMap(IUserContext userContext, ITaxon taxon)
{
FontName = TEXT_FONT;
IFactorSearchCriteria factorSearchCrieteria = new FactorSearchCriteria();
List <Int32> countyIds = new List <Int32>();
countyIds.Add((Int32)FactorId.CountyOccurrence);
factorSearchCrieteria.RestrictSearchToFactorIds = countyIds;
factorSearchCrieteria.RestrictReturnToScope = ArtDatabanken.Data.FactorSearchScope.LeafFactors;
_counties = CoreData.FactorManager.GetFactors(userContext, factorSearchCrieteria);
ISpeciesFactSearchCriteria parameters = new SpeciesFactSearchCriteria();
parameters.Taxa = new TaxonList {
taxon
};
parameters.Factors = new FactorList();
parameters.Factors = _counties;
parameters.IncludeNotValidHosts = true;
parameters.IncludeNotValidTaxa = true;
_countyInformation = CoreData.SpeciesFactManager.GetSpeciesFacts(userContext, parameters);
UpdateInformation = null;
if (!_countyInformation.IsNotEmpty())
{
_countyInformationExist = false;
}
}
public void CountyMapSecondConstructorTest()
{
IUserContext userContext = LoginTestUser();
IFactorSearchCriteria factorSearchCrieteria = new FactorSearchCriteria();
List <Int32> countyIds = new List <Int32>();
countyIds.Add((Int32)FactorId.CountyOccurrence);
factorSearchCrieteria.RestrictSearchToFactorIds = countyIds;
factorSearchCrieteria.RestrictReturnToScope = ArtDatabanken.Data.FactorSearchScope.LeafFactors;
FactorList counties = CoreData.FactorManager.GetFactors(userContext, factorSearchCrieteria);
ISpeciesFactSearchCriteria parameters = new SpeciesFactSearchCriteria();
ITaxon taxon = CoreData.TaxonManager.GetTaxon(userContext, 101656);
parameters.Taxa = new TaxonList {
taxon
};
parameters.Factors = counties;
parameters.IncludeNotValidHosts = true;
parameters.IncludeNotValidTaxa = true;
SpeciesFactList countyInformation = CoreData.SpeciesFactManager.GetSpeciesFacts(userContext, parameters);
string shapeFileName = Path.Combine(AbsoluteResourceFolderPath, "Sverigekarta med län.shp");
Console.WriteLine("Reading file: {0}", shapeFileName);
CountyOccurrenceMap.InitializeMap(shapeFileName);
CountyOccurrenceMap countyOccurenceMap = new CountyOccurrenceMap(countyInformation);
string imagePath = Path.Combine(AbsoluteTempFolderPath, "testSpeciesFactMapWithLegend.png");
Console.WriteLine("Generating image: {0}", imagePath);
countyOccurenceMap.Save(imagePath, System.Drawing.Imaging.ImageFormat.Png);
}
///// <summary>
///// Get factors that are used in Alva.
///// </summary>
//private void GetSpeciesInformationDocument()
//{
// IFactor speciesInformationDocumentIsPublishableFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentIsPublishable);
// ISpeciesFactSearchCriteria searchCriteria = new SpeciesFactSearchCriteria
// {
// Factors = new FactorList { speciesInformationDocumentIsPublishableFactor },
// Taxa = new TaxonList { mTaxon }
// };
// SpeciesFactList speciesFacts = CoreData.SpeciesFactManager.GetSpeciesFacts(mUserContext, searchCriteria);
// if (speciesFacts.IsNotEmpty())
// {
// ISpeciesFact speciesInformationDocumentIsPublishableSpeciesFact = speciesFacts[0];
// if (speciesInformationDocumentIsPublishableSpeciesFact.IsSpeciesInformationDocumentIsPublishableSpecified())
// {
// mTaxonSpeciesFact.IsSpeciesInformationDocumentPublishable = speciesInformationDocumentIsPublishableSpeciesFact.MainField.BooleanValue;
// if (mTaxonSpeciesFact.IsSpeciesInformationDocumentPublishable)
// {
// IFactor speciesInformationDocumentPreambleFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentPreamble);
// IFactor speciesInformationDocumentDescriptionFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentDescription);
// IFactor speciesInformationDocumentDistributionFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentDistribution);
// IFactor speciesInformationDocumentEcologyFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentEcology);
// IFactor speciesInformationDocumentThreatsFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentThreats);
// IFactor speciesInformationDocumentMeasuresFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentMeasures);
// IFactor speciesInformationDocumentExtraFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentExtra);
// IFactor speciesInformationDocumentReferencesFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentReferences);
// IFactor speciesInformationDocumentAuthorAndYearFactor = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentAuthorAndYear);
// IFactor speciesInformationDocumentItalicsInReferences = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentItalicsInReferences);
// IFactor speciesInformationDocumentItalicsInText = CoreData.FactorManager.GetFactor(mUserContext, FactorId.SpeciesInformationDocumentItalicsInText);
// ISpeciesFact speciesInformationDocumentPreambleSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentDescriptionSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentDistributionSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentEcologySpeciesFact = null;
// ISpeciesFact speciesInformationDocumentThreatsSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentMeasuresSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentExtraSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentReferencesSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentAuthorAndYearSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentItalicsInReferencesSpeciesFact = null;
// ISpeciesFact speciesInformationDocumentItalicsInTextSpeciesFact = null;
// searchCriteria.Factors.Remove(speciesInformationDocumentIsPublishableFactor);
// searchCriteria.Add(speciesInformationDocumentPreambleFactor);
// searchCriteria.Add(speciesInformationDocumentDescriptionFactor);
// searchCriteria.Add(speciesInformationDocumentDistributionFactor);
// searchCriteria.Add(speciesInformationDocumentEcologyFactor);
// searchCriteria.Add(speciesInformationDocumentThreatsFactor);
// searchCriteria.Add(speciesInformationDocumentMeasuresFactor);
// searchCriteria.Add(speciesInformationDocumentExtraFactor);
// searchCriteria.Add(speciesInformationDocumentReferencesFactor);
// searchCriteria.Add(speciesInformationDocumentAuthorAndYearFactor);
// searchCriteria.Add(speciesInformationDocumentItalicsInReferences);
// searchCriteria.Add(speciesInformationDocumentItalicsInText);
// speciesFacts = CoreData.SpeciesFactManager.GetSpeciesFacts(mUserContext, searchCriteria);
// if (speciesFacts.IsNotEmpty())
// {
// foreach (ISpeciesFact speciesFact in speciesFacts)
// {
// switch (speciesFact.Factor.Id)
// {
// case (int)FactorId.SpeciesInformationDocumentPreamble:
// speciesInformationDocumentPreambleSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentDescription:
// speciesInformationDocumentDescriptionSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentDistribution:
// speciesInformationDocumentDistributionSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentEcology:
// speciesInformationDocumentEcologySpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentThreats:
// speciesInformationDocumentThreatsSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentMeasures:
// speciesInformationDocumentMeasuresSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentExtra:
// speciesInformationDocumentExtraSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentReferences:
// speciesInformationDocumentReferencesSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentAuthorAndYear:
// speciesInformationDocumentAuthorAndYearSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentItalicsInReferences:
// speciesInformationDocumentItalicsInReferencesSpeciesFact = speciesFact;
// break;
// case (int)FactorId.SpeciesInformationDocumentItalicsInText:
// speciesInformationDocumentItalicsInTextSpeciesFact = speciesFact;
// break;
// }
// }
// }
// mTaxonSpeciesFact.InitSpeciesInformationDocumentInformation(speciesInformationDocumentPreambleSpeciesFact,
// speciesInformationDocumentDescriptionSpeciesFact,
// speciesInformationDocumentDistributionSpeciesFact,
// speciesInformationDocumentEcologySpeciesFact,
// speciesInformationDocumentThreatsSpeciesFact,
// speciesInformationDocumentMeasuresSpeciesFact,
// speciesInformationDocumentExtraSpeciesFact,
// speciesInformationDocumentReferencesSpeciesFact,
// speciesInformationDocumentAuthorAndYearSpeciesFact,
// speciesInformationDocumentItalicsInReferencesSpeciesFact,
// speciesInformationDocumentItalicsInTextSpeciesFact);
// }
// }
// }
//}
///// <summary>
///// Creates a list of Link items for all links recommended for a certain taxon.
///// </summary>
///// <param name="taxonId">The taxon.</param>
///// <returns>A list of link items.</returns>
//public static List<LinkItem> GetRecommendedLinks(int taxonId)
//{
// var sp = new Stopwatch();
// sp.Start();
// var links = new List<LinkItem>();
// var linkManager = new LinkManager();
// LinkItem item;
// IUserContext userContext = CoreData.UserManager.GetCurrentUser();
// ITaxon taxon = CoreData.TaxonManager.GetTaxon(userContext, taxonId);
// // Add link to Photos from Artportalen
// string url = linkManager.GetUrlToMediaAp(taxon.Id.ToString(CultureInfo.InvariantCulture));
// if (url.IsNotEmpty())
// {
// item = new LinkItem(LinkType.Url, LinkQuality.ApprovedByExpert, RedListResource.LinkToPhotosAPLabel, url);
// links.Add(item);
// }
// // Add links to search in Dyntaxa
// url = linkManager.GetUrlToDyntaxa(taxon.Id.ToString(CultureInfo.InvariantCulture));
// if (url.IsNotEmpty())
// {
// item = new LinkItem(LinkType.Url, LinkQuality.ApprovedByExpert, RedListResource.LinkToDyntaxaLabel, url);
// links.Add(item);
// }
// // Add link to Google images.
// url = linkManager.GetUrlToGoogleImagesResults(taxon.ScientificName);
// if (url.IsNotEmpty())
// {
// item = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToGoogleImagesLabel, url);
// links.Add(item);
// }
// if (taxon.ScientificName.IsNotEmpty())
// {
// // Add link to GBIF
// url = linkManager.GetUrlToGbif(taxon.ScientificName);
// if (url.IsNotEmpty())
// {
// item = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToGbifLabel, url);
// links.Add(item);
// }
// // Add link to EoL
// url = linkManager.GetUrlToEoL(taxon.ScientificName);
// if (url.IsNotEmpty())
// {
// item = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToEoLLabel, url);
// links.Add(item);
// }
// // Add link to Biodiversity Heritage Library.
// url = linkManager.GetUrlToBiodiversityHeritageLibrary(taxon.ScientificName);
// if (url.IsNotEmpty())
// {
// item = new LinkItem(LinkType.Url, LinkQuality.Automatic, "Biodiversity Heritage Library", url);
// links.Add(item);
// }
// }
// // Add a link to ITIS Taxon information.
// var itisNumberNames = taxon.GetTaxonNamesBySearchCriteria(userContext, (int)TaxonNameCategoryId.ItisNumber, null, null, true, false, false);
// foreach (var name in itisNumberNames)
// {
// url = AppSettings.Default.UrlToGetITISTaxonInformation.Replace("[Id]", name.Name);
// var linkItem = new LinkItem(LinkType.Url, LinkQuality.ApprovedByExpert, RedListResource.LinkToItisLabel, url);
// links.Add(linkItem);
// }
// var guidNames = taxon.GetTaxonNamesBySearchCriteria(userContext, (int)TaxonNameCategoryId.Guid, null, null, null, false, false);
// foreach (var name in guidNames)
// {
// LinkItem linkItem;
// // Add a link to PESI Taxon information.
// url = AppSettings.Default.UrlToGetPESITaxonInformation.Replace("[GUID]", name.Name);
// if (name.IsRecommended)
// {
// linkItem = new LinkItem(LinkType.Url, LinkQuality.ApprovedByExpert, RedListResource.LinkToPesiLabel, url);
// links.Add(linkItem);
// }
// else
// {
// linkItem = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToPesiLabel, url);
// links.Add(linkItem);
// }
// // Add a link to Fauna Europea Taxon information.
// url = linkManager.GetUrlToFaunaEuropeaTaxonInformation(name.Name);
// if (url.IsNotEmpty())
// {
// linkItem = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToFaunaEuropeaLabel, url);
// links.Add(linkItem);
// }
// // Add a link to Marbef (ERMS) Taxon information.
// url = linkManager.GetUrlToMarbefTaxonInformation(name.Name);
// if (url.IsNotEmpty())
// {
// linkItem = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToMarbefLabel, url);
// links.Add(linkItem);
// url = linkManager.GetUrlToNordicMicroalgaeTaxonInformation(taxon.ScientificName);
// linkItem = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToNordicMicroalgaeLabel, url);
// links.Add(linkItem);
// }
// // Add a link to Algaebase Taxon information.
// url = linkManager.GetUrlToAlgaebaseTaxonInformation(name.Name);
// if (url.IsNotEmpty())
// {
// linkItem = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToAlgaebaseLabel, url);
// links.Add(linkItem);
// url = linkManager.GetUrlToNordicMicroalgaeTaxonInformation(taxon.ScientificName);
// linkItem = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToNordicMicroalgaeLabel, url);
// links.Add(linkItem);
// }
// }
// // Add link to Naturforskaren taxon information
// url = linkManager.GetUrlToNaturforskaren(taxon.ScientificName);
// if (url.IsNotEmpty())
// {
// item = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToNaturforskarenLabel, url);
// links.Add(item);
// }
// // Add link to WIKI taxon information
// url = linkManager.GetUrlToWikipedia(taxon.ScientificName);
// if (url.IsNotEmpty())
// {
// item = new LinkItem(LinkType.Url, LinkQuality.Automatic, RedListResource.LinkToWikipediaLabel, url);
// links.Add(item);
// }
// sp.Stop();
// Debug.WriteLine("TaxonInfo - Retrieving links: {0:N0} milliseconds", sp.ElapsedMilliseconds);
// return links;
//}
//public byte[] GetCountyMap(ITaxon taxon)
//{
// // Set swedish locale
// SetSwedishLangugage();
// // Check so that we have a valid SpeciesFactList containing elements
// if (IsSpeciesFactFactListEmpty(taxon))
// {
// return null;
// }
// byte[] buffer = null;
// var returnStream = new MemoryStream();
// try
// {
// var countyMapProvider = new RedListCountyOccurrenceMap(mUserContext, taxon);
// if (countyMapProvider.CountyInformationExist)
// {
// countyMapProvider.Height = 800;
// countyMapProvider.UpdateInformation = RedListResource.TaxonInfoDistributionInSwedenCountyOccurrence;
// var map = countyMapProvider.Bitmap;
// map.Save(returnStream, ImageFormat.Png);
// buffer = returnStream.GetBuffer();
// returnStream.Close();
// }
// }
// catch (Exception ex)
// {
// throw new Exception("Failed to update county map cache", ex);
// }
// return buffer;
//}
private bool IsSpeciesFactFactListEmpty(ITaxon taxon)
{
IFactorSearchCriteria factorSearchCrieteria = new FactorSearchCriteria();
var countyIds = new List <int> {
(int)FactorId.CountyOccurrence
};
factorSearchCrieteria.RestrictSearchToFactorIds = countyIds;
factorSearchCrieteria.RestrictReturnToScope = FactorSearchScope.LeafFactors;
FactorList counties = CoreData.FactorManager.GetFactors(mUserContext, factorSearchCrieteria);
ISpeciesFactSearchCriteria parameters = new SpeciesFactSearchCriteria();
parameters.Taxa = new TaxonList {
taxon
};
parameters.Factors = new FactorList();
parameters.Factors = counties;
parameters.IncludeNotValidHosts = true;
parameters.IncludeNotValidTaxa = true;
SpeciesFactList sList = CoreData.SpeciesFactManager.GetSpeciesFacts(mUserContext, parameters);
return(sList.IsEmpty());
}
public void GetFactorsBySearchCriteria()
{
List <int> factorIds = new List <int> {
1, 2, 3
};
IFactorSearchCriteria searchCriteria = new FactorSearchCriteria();
FactorList factors;
searchCriteria.RestrictSearchToFactorIds = factorIds;
searchCriteria.NameSearchString = null;
factors = GetFactorDataSource().GetFactors(GetUserContext(), searchCriteria);
Assert.IsNotNull(factors);
Assert.AreEqual(factorIds.Count, factors.Count);
searchCriteria.RestrictReturnToScope = FactorSearchScope.AllChildFactors;
factors = GetFactorDataSource().GetFactors(GetUserContext(), searchCriteria);
Assert.IsNotNull(factors);
Assert.IsTrue(factors.Count > 30);
}
/// <summary>
/// Get species facts with species document information.
/// </summary>
/// <param name="userContext">User context.</param>
private void GetSpeciesFacts(IUserContext userContext)
{
FactorList factors;
FactorSearchCriteria factorSearchCriteria;
ISpeciesFactSearchCriteria speciesFactSearchCriteria;
// Get factors.
factorSearchCriteria = new FactorSearchCriteria();
factorSearchCriteria.RestrictSearchToFactorIds = new List <Int32>();
factorSearchCriteria.RestrictSearchToFactorIds.Add((Int32)FactorId.SpeciesInformationDocumentGroup);
factorSearchCriteria.RestrictReturnToScope = FactorSearchScope.LeafFactors;
factors = CoreData.FactorManager.GetFactors(userContext, factorSearchCriteria);
// Get species facts.
speciesFactSearchCriteria = new SpeciesFactSearchCriteria();
speciesFactSearchCriteria.AddTaxon(_taxon);
speciesFactSearchCriteria.Factors = factors;
speciesFactSearchCriteria.IncludeNotValidHosts = true;
speciesFactSearchCriteria.IncludeNotValidTaxa = true;
_speciesFacts = CoreData.SpeciesFactManager.GetSpeciesFacts(userContext, speciesFactSearchCriteria);
}
