public void ExtractProtocol(string resultFileName)
{
var reportPath = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.MyDocuments), "MyAssays\\Results\\");
ExtractProtocolHelper.DeleteTempFolder();
ExtractProtocolHelper.ExtractResultsTo(null, null, Directory.GetFiles(reportPath, "*.assay-results")[0]);
}
public void CheckReportXML(string resultsName, string version, string expectedFileName)
{
ExtractProtocolHelper.DeleteTempFolder();
ExtractProtocolHelper.ExtractResultsTo(null, null, resultsName);
var resultsFolder = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.Desktop), "temp", version);
var actualXML = File.ReadAllText(Directory.GetFiles(resultsFolder, "*.report.xml").First()).Replace(" ", "").Replace("\r\n", "");
/*
* We will split the expected file on several lines and will validate an existence each of one
* because the *.report.xml file contains date and time (till seconds).
* It may cause differences in seconds and test will not be stable.
*/
var expectedXMLStrings = File.ReadAllLines(Path.Combine(HelperConstants.getExeAssemblyPath(), @"ExpectedRunDetails\QualityControl", expectedFileName));
Report.Info("Actual xml:" + actualXML);
Report.Info("Expected xml:" + expectedXMLStrings[0] + expectedXMLStrings[1]);
if (actualXML.Contains(expectedXMLStrings[0]) && actualXML.Contains(expectedXMLStrings[1]))
{
Report.Success("Tables was added to *.report.xml");
}
else
{
Report.Failure("QC analysis report is not as expected.");
}
ExtractProtocolHelper.DeleteTempFolder();
}
public void cleanHelper()
{
CleanDataHelper.DeleteProtocols();
CleanDataHelper.DeleteResults();
CleanDataHelper.DeleteCustomLayouts();
ExtractProtocolHelper.DeleteTempFolder();
Delay.Seconds(2);
}
public void CompareExportedFile(string fileName)
{
ExtractProtocolHelper.DeleteTempFolder();
ExtractProtocolHelper.ExtractResultsTo(null, null, fileName + ".assay-results");
var pathToResultsXML = Path.Combine(HelperConstants.getDesktopTempFolder(), "2");
var pathToReportXML = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.MyDocuments), @"MyAssays\Reports");
var resultsXML = File.ReadAllText(Directory.GetFiles(pathToResultsXML, "*.report.xml").First());
var reportXML = File.ReadAllText(Directory.GetFiles(pathToReportXML, "*.xml").First());
Report.Info("Comparing xml file in *.assay-results file and in Report folder.");
Validate.AreEqual(reportXML, resultsXML);
}
public void ValidateUnitsInXML(string protocolName, string filename)
{
ExtractProtocolHelper.DeleteTempFolder();
ExtractProtocolHelper.ExtractProtocolTo(null, null, protocolName);
var path = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.Desktop), "temp");
var actualXML = File.ReadAllText(Directory.GetFiles(path, "*.assay.xml").First()).Replace(" ", "").Replace("\r", "").Replace("\n", "");
Report.Info("Actual units in xml file:" + actualXML);
var expectedXML = File.ReadAllText(Path.Combine(HelperConstants.getExeAssemblyPath(), @"ExpectedRunDetails\XMLs", filename)).Replace(" ", "")
.Replace("\r", "")
.Replace("\n", "");
Report.Info("Expected units in xml file:" + expectedXML);
Validate.IsTrue(actualXML.Contains(expectedXML), "Actual *.assay.xml file contains expected units.");
ExtractProtocolHelper.DeleteTempFolder();
}
public void checkTemplateDocs(string name)
{
ExtractProtocolHelper.DeleteTempFolder();
ExtractProtocolHelper.ExtractResultsTo(null, null, name + " (1).assay-results");
string pathTo1Template = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.Desktop), @"temp\1");
string innerPath = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.Desktop), @"temp\inner");
ExtractProtocolHelper.ExtractProtocolTo(pathTo1Template, innerPath, name + ".assay-protocol");
string innerPathFull = Path.Combine(innerPath, "Template.docx");
if (File.Exists(innerPathFull))
{
Report.Error("Template.docx file have not to exists in the Version 1.");
}
else
{
Report.Success("Template.docx file does not exist in the Version 1.");
}
Delay.Seconds(2);
ExtractProtocolHelper.DeleteTempFolder();
ExtractProtocolHelper.ExtractResultsTo(null, null, name + " (1).assay-results");
string pathTo2Template = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.Desktop), @"temp\2");
ExtractProtocolHelper.ExtractProtocolTo(pathTo2Template, innerPath, name + ".assay-protocol");
if (!File.Exists(innerPathFull))
{
Report.Error("Template.docx file have to exists in the Version 2.");
}
else
{
Report.Success("Template.docx file does exist in the Version 2.");
}
Delay.Seconds(2);
ExtractProtocolHelper.DeleteTempFolder();
}
public void CheckQCInProtocol(string protocolName)
{
ExtractProtocolHelper.DeleteTempFolder();
ExtractProtocolHelper.ExtractProtocolTo(null, null, protocolName);
var tempFolder = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.Desktop), "temp");
var resultsFolder = Path.Combine(Environment.GetFolderPath(Environment.SpecialFolder.MyDocuments), @"MyAssays\Results\");
var settingsQC = Directory.GetFiles(tempFolder, "settings.qc.xml");
if (settingsQC.Length == 0)
{
Report.Failure("Protocol does not contains a settings.qc.xml file.");
}
else
{
var actualQC = File.ReadAllText(settingsQC.First()).Replace(" ", "").Replace("\r\n", "");
var expectedQC = File.ReadAllText(Path.Combine(HelperConstants.getExeAssemblyPath(), @"ExpectedRunDetails\QualityControl\SettingsMTA.qc.txt")).Replace("PATH_TO_RESULTS", resultsFolder)
.Replace(" ", "")
.Replace("\r\n", "");
Report.Info("Actual xml:" + actualQC);
Report.Info("Expected xml:" + expectedQC);
if (actualQC.Equals(expectedQC.Replace("BIT_NUM", "8")) || actualQC.Equals(expectedQC.Replace("BIT_NUM", "16")))
{
Report.Success("QC analysis report contains selected table output types for observation.");
}
else
{
Report.Failure("QC analysis settings file is not as expected.");
}
}
ExtractProtocolHelper.DeleteTempFolder();
}
public void deleteTempFolder()
{
ExtractProtocolHelper.DeleteTempFolder();
}
public void extractResult(string name)
{
ExtractProtocolHelper.ExtractResultsTo(null, null, name + " (1).assay-results");
}
