private void AssertDataCorrect(DetectionsPlotPane pane, int refIndex, float qValue, bool record = false)
{
WaitForConditionUI(() => pane.CurrentData != null &&
pane.CurrentData.QValueCutoff == qValue &&
DetectionPlotData.GetDataCache().Status == DetectionPlotData.DetectionDataCache.CacheStatus.idle,
() => $"Retrieving data for qValue {qValue}, refIndex {refIndex} took too long.");
WaitForGraphs();
WaitForCondition(() => pane.CurrentData.IsValid);
if (record)
{
Console.WriteLine(@"Peptides");
pane.CurrentData.GetTargetData(DetectionsGraphController.TargetType.PEPTIDE).TargetsCount
.ForEach((cnt) => { Console.Write($@"{cnt}, "); });
Console.WriteLine(@"\nPrecursors");
pane.CurrentData.GetTargetData(DetectionsGraphController.TargetType.PRECURSOR).TargetsCount
.ForEach((cnt) => { Console.Write($@"{cnt}, "); });
}
Assert.IsTrue(
REF_DATA[refIndex].SequenceEqual(
pane.CurrentData.GetTargetData(DetectionsGraphController.TargetType.PEPTIDE).TargetsCount));
Assert.IsTrue(
REF_DATA[refIndex + 1].SequenceEqual(
pane.CurrentData.GetTargetData(DetectionsGraphController.TargetType.PRECURSOR).TargetsCount));
}
protected override void DoTest()
{
OpenDocument(TestFilesDir.GetTestPath(@"DIA-TTOF-tutorial.sky"));
WaitForDocumentLoaded();
RunUI(() => { SkylineWindow.ShowDetectionsReplicateComparisonGraph(); });
WaitForGraphs();
GraphSummary graph = SkylineWindow.DetectionsPlot;
var toolbar = graph.Toolbar as DetectionsToolbar;
Assert.IsNotNull(toolbar);
RunUI(() => { toolbar.CbLevel.SelectedItem = DetectionsGraphController.TargetType.PRECURSOR; });
WaitForGraphs();
DetectionsPlotPane pane;
Assert.IsTrue(graph.TryGetGraphPane(out pane));
Assert.IsTrue(pane.HasToolbar);
//use properties dialog to update the q-value
var propDialog = ShowDialog <DetectionToolbarProperties>(() =>
{
toolbar.pbProperties_Click(graph.GraphControl, new EventArgs());
});
//verify data correct for 2 q-values
RunUI(() =>
{
propDialog.SetQValueTo(0.003f);
propDialog.OkDialog();
});
WaitForClosedForm(propDialog);
WaitForCondition(() => (DetectionsGraphController.Settings.QValueCutoff == 0.003f));
AssertDataCorrect(pane, 0, 0.003f);
//use properties dialog to update the q-value
propDialog = ShowDialog <DetectionToolbarProperties>(() =>
{
toolbar.pbProperties_Click(graph.GraphControl, new EventArgs());
});
RunUI(() =>
{
propDialog.SetQValueTo(0.001f);
propDialog.OkDialog();
});
WaitForClosedForm(propDialog);
WaitForCondition(() => (DetectionsGraphController.Settings.QValueCutoff == 0.001f));
AssertDataCorrect(pane, 2, 0.001f);
//verify the number of the bars on the plot
RunUI(() =>
{
Assert.IsTrue(
pane.CurveList[0].IsBar && pane.CurveList[0].Points.Count == REF_DATA[0].Length);
});
string[] tipText =
{
Resources.DetectionPlotPane_Tooltip_Replicate + TextUtil.SEPARATOR_TSV_STR + @"2_SW-B",
string.Format(Resources.DetectionPlotPane_Tooltip_Count, DetectionsGraphController.TargetType.PRECURSOR) +
TextUtil.SEPARATOR_TSV_STR + 118.ToString(CultureInfo.CurrentCulture),
Resources.DetectionPlotPane_Tooltip_CumulativeCount + TextUtil.SEPARATOR_TSV_STR +
123.ToString(CultureInfo.CurrentCulture),
Resources.DetectionPlotPane_Tooltip_AllCount + TextUtil.SEPARATOR_TSV_STR +
115.ToString(CultureInfo.CurrentCulture),
Resources.DetectionPlotPane_Tooltip_QMedian + TextUtil.SEPARATOR_TSV_STR +
(6.0d).ToString(@"F1", CultureInfo.CurrentCulture)
};
RunUI(() =>
{
Assert.IsNotNull(pane.ToolTip);
pane.PopulateTooltip(1);
//verify the tooltip text
CollectionAssert.AreEqual(tipText, pane.ToolTip.TipLines);
});
//test the data correct after a doc change (delete peptide)
RunUI(() =>
{
SkylineWindow.SelectedPath = SkylineWindow.Document.GetPathTo((int)SrmDocument.Level.Molecules, 12);
SkylineWindow.EditDelete();
});
WaitForGraphs();
WaitForConditionUI(() => DetectionPlotData.GetDataCache().Datas.Any((dat) =>
ReferenceEquals(SkylineWindow.DocumentUI, dat.Document) &&
DetectionsGraphController.Settings.QValueCutoff == dat.QValueCutoff),
"Cache is not updated on document change.");
//verify that the cache is purged after the document update
RunUI(() =>
{
Assert.IsTrue(DetectionPlotData.GetDataCache().Datas.All((dat) =>
ReferenceEquals(SkylineWindow.DocumentUI, dat.Document)));
});
AssertDataCorrect(pane, 4, 0.001f);
RunUI(() => { SkylineWindow.ShowDetectionsHistogramGraph(); });
WaitForGraphs();
DetectionsHistogramPane paneHistogram;
var graphHistogram = SkylineWindow.DetectionsPlot;
Assert.IsTrue(graphHistogram.TryGetGraphPane(out paneHistogram), "Cannot get histogram pane.");
//display and hide tooltip
string[] histogramTipText =
{
Resources.DetectionHistogramPane_Tooltip_ReplicateCount + TextUtil.SEPARATOR_TSV_STR +
5.ToString(CultureInfo.CurrentCulture),
String.Format(Resources.DetectionHistogramPane_Tooltip_Count, DetectionsGraphController.TargetType.PRECURSOR) +
TextUtil.SEPARATOR_TSV_STR + 102.ToString(CultureInfo.CurrentCulture),
};
RunUI(() =>
{
Assert.IsNotNull(paneHistogram.ToolTip, "No tooltip found.");
paneHistogram.PopulateTooltip(5);
//verify the tooltip text
CollectionAssert.AreEqual(histogramTipText, paneHistogram.ToolTip.TipLines);
});
RunUI(() =>
{
graph.Close();
graphHistogram.Close();
});
WaitForGraphs();
}
