public void ZeroFillerCompareNewAndOld()
{
Run run = new MSScanFromTextFileRun(FileRefs.RawDataMSFiles.TextFileMS_std1);
var msgen = MSGeneratorFactory.CreateMSGenerator(run.MSFileType);
var zeroFiller = new DeconToolsZeroFiller(3);
msgen.Execute(run.ResultCollection);
var numZerosToFill = 3;
var newZeroFilled = zeroFiller.ZeroFill(run.XYData.Xvalues, run.XYData.Yvalues, numZerosToFill);
// var oldZeroFilled = zeroFiller.ZeroFillOld(run.XYData.Xvalues, run.XYData.Yvalues, numZerosToFill);
var lowerMZ = 625.48;
var upperMZ = 626.18;
run.XYData = run.XYData.TrimData(lowerMZ, upperMZ);
newZeroFilled = newZeroFilled.TrimData(lowerMZ, upperMZ);
// oldZeroFilled = oldZeroFilled.TrimData(lowerMZ, upperMZ);
Console.WriteLine("---------- before zerofilling ---------------");
TestUtilities.DisplayXYValues(run.XYData);
Console.WriteLine("---------- after zerofilling ---------------");
TestUtilities.DisplayXYValues(newZeroFilled);
// Console.WriteLine("---------- after zerofilling using DeconEngine ---------------");
// TestUtilities.DisplayXYValues(oldZeroFilled);
}
public void ZeroFillerTest1()
{
Run run = new MSScanFromTextFileRun(FileRefs.RawDataMSFiles.TextFileMS_std1);
var msgen = MSGeneratorFactory.CreateMSGenerator(run.MSFileType);
var zeroFiller = new DeconToolsZeroFiller(3);
msgen.Execute(run.ResultCollection);
// Delete data points such that we only retain 50% of the data
var fractionToKeep = 0.50;
var distanceBetweenPoints = (int)(run.XYData.Xvalues.Length / (run.XYData.Xvalues.Length * fractionToKeep));
var newXVals = new List <double>();
var newYVals = new List <double>();
for (var i = 0; i < run.XYData.Xvalues.Length; i += distanceBetweenPoints)
{
if (i < run.XYData.Xvalues.Length)
{
newXVals.Add(run.XYData.Xvalues[i]);
newYVals.Add(run.XYData.Yvalues[i]);
}
}
run.XYData.Xvalues = newXVals.ToArray();
run.XYData.Yvalues = newYVals.ToArray();
var numZerosToFill = 3;
var newZeroFilled = zeroFiller.ZeroFill(run.XYData.Xvalues, run.XYData.Yvalues, numZerosToFill);
double lowerMZ = 1000;
double upperMZ = 1300;
run.XYData = run.XYData.TrimData(lowerMZ, upperMZ);
newZeroFilled = newZeroFilled.TrimData(lowerMZ, upperMZ);
Console.WriteLine("---------- before zerofilling ---------------");
TestUtilities.DisplayXYValues(run.XYData, lowerMZ, upperMZ);
Console.WriteLine("---------- after zerofilling ---------------");
TestUtilities.DisplayXYValues(newZeroFilled, lowerMZ, upperMZ);
Assert.IsTrue(newZeroFilled.Xvalues.Length > run.XYData.Xvalues.Length);
}