コード例 #1
0
        private DataTable createDataToExport(Simulation simulation)
        {
            //Id	Time	Output1	Output2	...	OutputN

            var dataTable = new DataTable();

            if (!simulation.HasResults)
            {
                return(dataTable);
            }

            var simulationResults = simulation.Results;

            var allQuantities = _quantityRetriever.QuantitiesFrom(simulation);

            dataTable.AddColumn <int>(CoreConstants.SimulationResults.IndividualId);
            dataTable.AddColumn <string>(CoreConstants.NameWithUnitFor(CoreConstants.SimulationResults.Time, _timeDimension.BaseUnit));

            var allQuantityPaths = simulationResults.AllQuantityPaths();

            foreach (var quantityPath in allQuantityPaths)
            {
                var quantity = allQuantities[quantityPath];
                if (quantity == null)
                {
                    continue;
                }
                dataTable.AddColumn <string>(CoreConstants.NameWithUnitFor(quantityPath, quantity.Dimension.BaseUnit));
            }

            dataTable.BeginLoadData();
            int numberOfValues = simulationResults.Time.Length;

            foreach (var individualResults in simulationResults.OrderBy(x => x.IndividualId))
            {
                var allQuantitiesCache = new Cache <string, QuantityValues>(x => x.QuantityPath);
                allQuantitiesCache.AddRange(individualResults);

                for (int i = 0; i < numberOfValues; i++)
                {
                    var row = dataTable.NewRow();
                    row[CoreConstants.SimulationResults.IndividualId] = individualResults.IndividualId;
                    row[CoreConstants.NameWithUnitFor(CoreConstants.SimulationResults.Time, _timeDimension.BaseUnit)] = simulationResults.Time[i].ConvertedTo <string>();

                    foreach (var quantityPath in allQuantityPaths)
                    {
                        var quantity = allQuantities[quantityPath];
                        if (quantity == null)
                        {
                            continue;
                        }

                        row[CoreConstants.NameWithUnitFor(quantityPath, quantity.Dimension.BaseUnit)] = allQuantitiesCache[quantityPath][i].ConvertedTo <string>();
                    }
                    dataTable.Rows.Add(row);
                }
            }
            dataTable.EndLoadData();
            return(dataTable);
        }
コード例 #2
0
        public void should_have_created_the_expected_number_of_rows_in_the_datatable()
        {
            _dataTable.Rows.Count.ShouldBeEqualTo(6);
            _dataTable.AllValuesInColumn <float>(_xAxis.Caption).ShouldOnlyContain(1, 2, 3, 1, 2, 3);
            var values = _dataTable.AllValuesInColumn <object>(CoreConstants.CompositeNameFor(PKSimConstants.UI.LowerValue, _yAxis.Caption));

            values[0].ShouldBeEqualTo(DBNull.Value);
            values[1].ShouldBeEqualTo(20);
            values[2].ShouldBeEqualTo(10);
            values[3].ShouldBeEqualTo(20);
            values[4].ShouldBeEqualTo(30);
            values[5].ShouldBeEqualTo(DBNull.Value);

            values = _dataTable.AllValuesInColumn <object>(_yAxis.Caption);
            values[0].ShouldBeEqualTo(10);
            values[1].ShouldBeEqualTo(DBNull.Value);
            values[2].ShouldBeEqualTo(10);
            values[3].ShouldBeEqualTo(20);
            values[4].ShouldBeEqualTo(30);
            values[5].ShouldBeEqualTo(40);

            values = _dataTable.AllValuesInColumn <object>(CoreConstants.CompositeNameFor(PKSimConstants.UI.UpperValue, _yAxis.Caption));
            values[0].ShouldBeEqualTo(DBNull.Value);
            values[1].ShouldBeEqualTo(30);
            values[2].ShouldBeEqualTo(10);
            values[3].ShouldBeEqualTo(20);
            values[4].ShouldBeEqualTo(30);
            values[5].ShouldBeEqualTo(DBNull.Value);
        }
コード例 #3
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 protected override void Context()
 {
     base.Context();
     _entity = new Observer().WithName(CoreConstants.CompositeNameFor(CoreConstants.Observer.FRACTION_OF_DOSE, _drugName, CoreConstants.Organ.Liver, CoreConstants.Compartment.Intracellular))
               .WithParentContainer(_drugContainerInLiverCell)
               .WithDimension(_fractionDimension);
 }
コード例 #4
0
        private void updateInteractionFactor(IContainer processParameterContainer, string moleculeName, IEnumerable <IInteractionKineticUpdaterSpecification> allUpdatingKinetics, IFormulaCache formulaCache, string parameterName, Func <IParameter, string> createFormulaAction)
        {
            var interactionFactor = processParameterContainer.Parameter(parameterName);

            if (!allUpdatingKinetics.Any() || interactionFactor == null)
            {
                return;
            }

            var formulaName = CoreConstants.CompositeNameFor(processParameterContainer.Name, moleculeName, parameterName);
            var formula     = formulaCache.FindByName(formulaName) as ExplicitFormula;

            if (formula != null)
            {
                interactionFactor.Formula = formula;
                return;
            }

            formula = _objectBaseFactory.Create <ExplicitFormula>()
                      .WithName(formulaName)
                      .WithDimension(interactionFactor.Dimension);

            interactionFactor.Formula = formula;
            formula.FormulaString     = createFormulaAction(interactionFactor);
            formulaCache.Add(formula);
        }
コード例 #5
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        private IReactionBuilder createReactionFromProcess(IMoleculeBuilder moleculeBuilder, CompoundProcess process,
                                                           IReadOnlyCollection <string> forbiddenNames)
        {
            var reactionName = CoreConstants.CompositeNameFor(moleculeBuilder.Name, process.Name);

            return(createReactionFromProcess(process, reactionName, forbiddenNames));
        }
コード例 #6
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        private void addLiverZoneCompartmentObserver(IObserverBuilder observerBuilder, string compartment, IObserverBuildingBlock observerBuildingBlock, Compound compound)
        {
            var observerName = CoreConstants.CompositeNameFor(observerBuilder.Name, CoreConstants.Organ.Liver, compartment);

            if (observerBuildingBlock.ExistsByName(observerName))
            {
                return;
            }

            var observer = _objectBaseFactory.Create <IContainerObserverBuilder>()
                           .WithName(observerName)
                           .WithDimension(_dimensionRepository.Fraction);

            observer.ForAll = false;
            observerBuilder.MoleculeNames().Each(observer.AddMoleculeName);

            observer.ContainerCriteria = Create.Criteria(x => x.With(CoreConstants.Organ.Liver)
                                                         .And.With(compartment)
                                                         .And.Not(CoreConstants.Compartment.Pericentral)
                                                         .And.Not(CoreConstants.Compartment.Periportal));

            var formula = _objectBaseFactory.Create <ExplicitFormula>()
                          .WithName(observerName)
                          .WithFormulaString("(M_periportal + M_pericentral)/" + TOTAL_DRUG_MASS_ALIAS)
                          .WithDimension(_dimensionRepository.Fraction);

            formula.AddObjectPath(createZoneAmoutPath(compartment, CoreConstants.Compartment.Periportal, "M_periportal"));
            formula.AddObjectPath(createZoneAmoutPath(compartment, CoreConstants.Compartment.Pericentral, "M_pericentral"));
            formula.AddObjectPath(createTotalDrugMassObjectPath(compound.Name));

            observer.Formula = formula;
            observerBuildingBlock.Add(observer);
            observerBuildingBlock.AddFormula(formula);
        }
コード例 #7
0
ファイル: BatchStartOptions.cs プロジェクト: valdiman/PK-Sim
 private void updateOutputFolderFrom(string outputFolder)
 {
     OutputFolder = outputFolder;
     if (string.IsNullOrEmpty(LogFileFullPath))
     {
         LogFileFullPath = CoreConstants.DefaultBatchLogFullPath(OutputFolder);
     }
 }
コード例 #8
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        private IReactionBuilder createReactionFromProcess(CompoundProcess process, string reactionName, IReadOnlyCollection <string> forbiddenNames)
        {
            //retrieve process for the simulation and create a clone
            var reaction = createReactionFromProcess(process, _simulationActiveProcessRepository.ProcessFor <PKSimReaction>(process.InternalName), reactionName, forbiddenNames);

            //make sure formula name is unique as it can be shared among processes
            reaction.Formula.Name = CoreConstants.CompositeNameFor(reaction.Name, reaction.Formula.Name);
            return(reaction);
        }
コード例 #9
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        public void should_have_created_the_expected_number_of_columns_in_the_datatable()
        {
            _dataTable.Columns.Count.ShouldBeEqualTo(6);

            _dataTable.Columns[_xAxis.Caption].ShouldNotBeNull();
            _dataTable.Columns[CoreConstants.CompositeNameFor(PKSimConstants.UI.LowerValue, _yAxis.Caption)].ShouldNotBeNull();
            _dataTable.Columns[_yAxis.Caption].ShouldNotBeNull();
            _dataTable.Columns[CoreConstants.CompositeNameFor(PKSimConstants.UI.UpperValue, _yAxis.Caption)].ShouldNotBeNull();
        }
コード例 #10
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        public void should_have_created_a_reaction_using_the_metabolite_as_product_in_liver_pericentral_intracellular()
        {
            var reactionInLiver = _simulation.Model.Root.EntityAt <IReaction>(Constants.ORGANISM, CoreConstants.Organ.LIVER,
                                                                              CoreConstants.Compartment.PERICENTRAL, CoreConstants.Compartment.INTRACELLULAR,
                                                                              CoreConstants.CompositeNameFor(_compound.Name, _parentMetabolizationCYP3A4.Name));

            reactionInLiver.ShouldNotBeNull();
            reactionInLiver.Products.Find(x => x.Partner.Name == _metabolite.Name).ShouldNotBeNull();
        }
コード例 #11
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 public void should_have_created_the_expected_number_of_columns_in_the_pivoted_datatable()
 {
     _pivotedDataTable.Columns.Count.ShouldBeEqualTo(5);
     _pivotedDataTable.Columns.Contains(_xAxis.Caption).ShouldBeTrue();
     _pivotedDataTable.Columns[_xAxis.Caption].DataType.ShouldBeEqualTo(typeof(float));
     _pivotedDataTable.Columns.Contains(string.Format("Male.Liver({0})", CoreConstants.CompositeNameFor(PKSimConstants.UI.LowerValue, _yAxis.Caption))).ShouldBeTrue();
     _pivotedDataTable.Columns.Contains(string.Format("Male.Liver({0})", _yAxis.Caption)).ShouldBeTrue();
     _pivotedDataTable.Columns.Contains(string.Format("Male.Liver({0})", CoreConstants.CompositeNameFor(PKSimConstants.UI.UpperValue, _yAxis.Caption))).ShouldBeTrue();
     _pivotedDataTable.Columns.Contains(string.Format("Female.Kidney({0})", _yAxis.Caption)).ShouldBeTrue();
 }
コード例 #12
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 public void should_have_created_the_expected_number_of_rows_in_the_datatable()
 {
     _dataTable.Rows.Count.ShouldBeEqualTo(3);
     _dataTable.AllValuesInColumn <float>(_xAxis.Caption).ShouldOnlyContain(1, 2, 3);
     _dataTable.AllValuesInColumn <float>(CoreConstants.CompositeNameFor(PKSimConstants.UI.Minimum, _xAxis.Caption)).ShouldOnlyContain(0, 1.8f, 2f);
     _dataTable.AllValuesInColumn <float>(CoreConstants.CompositeNameFor(PKSimConstants.UI.LowerPercentile, _yAxis.Caption)).ShouldOnlyContain(10, 20, 30);
     _dataTable.AllValuesInColumn <float>(_yAxis.Caption).ShouldOnlyContain(20, 30, 40);
     _dataTable.AllValuesInColumn <float>(CoreConstants.CompositeNameFor(PKSimConstants.UI.UpperPercentile, _yAxis.Caption)).ShouldOnlyContain(30, 40, 50);
     _dataTable.AllValuesInColumn <float>(CoreConstants.CompositeNameFor(PKSimConstants.UI.Maximum, _xAxis.Caption)).ShouldOnlyContain(1.5f, 2.5f, 4f);
 }
コード例 #13
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        public virtual void SelectOutputFolder()
        {
            var outputFolder = _dialogCreator.AskForFolder("Select output folder where results will be exported", CoreConstants.DirectoryKey.BATCH);

            if (string.IsNullOrEmpty(outputFolder))
            {
                return;
            }
            _dto.OutputFolder = outputFolder;
            _logFileFullPath  = CoreConstants.DefaultBatchLogFullPath(outputFolder);
        }
コード例 #14
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        public void should_create_a_fraction_of_dose_observer_for_the_unspecified_metabolite_in_the_liver_as_sum_of_the_fraction_in_liver_periportal_and_liver_pericentral()
        {
            var enzymaticProcessSelection = ProcessSelectionFor(_parentMetabolizationCYP2D6);
            var observerName      = CoreConstants.Observer.ObserverNameFrom(CoreConstants.Observer.FRACTION_OF_DOSE, _compound.Name);
            var liverCellCYP2D6   = _simulation.Model.Root.EntityAt <Container>(Constants.ORGANISM, CoreConstants.Organ.LIVER, CoreConstants.Compartment.INTRACELLULAR, enzymaticProcessSelection.ProductName());
            var observerLiverCell = liverCellCYP2D6.Children.FindByName(CoreConstants.CompositeNameFor(observerName, CoreConstants.Organ.LIVER, CoreConstants.Compartment.INTRACELLULAR)).DowncastTo <IObserver>();

            observerLiverCell.ShouldNotBeNull();

            observerLiverCell.Formula.DowncastTo <ExplicitFormula>().FormulaString.ShouldBeEqualTo("(M_periportal + M_pericentral)/TotalDrugMass");
        }
コード例 #15
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        public void the_created_process_should_have_two_parameters_enzyme_concentration_and_cl_spec_per_enzyme_hidden_set_to_one()
        {
            var processName      = CoreConstants.CompositeNameFor(_compound.Name, _liverClearance.Name);
            var processContainer = _simulation.Model.Root.EntityAt <Container>(processName);

            processContainer.Parameter(CoreConstantsForSpecs.Parameter.ENZYME_CONCENTRATION).Value.ShouldBeEqualTo(1);
            processContainer.Parameter(CoreConstantsForSpecs.Parameter.ENZYME_CONCENTRATION).Visible.ShouldBeFalse();

            processContainer.Parameter(CoreConstantsForSpecs.Parameter.CL_SPEC_PER_ENZYME).Value.ShouldBeEqualTo(processContainer.Parameter(CoreConstants.Parameters.SPECIFIC_CLEARANCE).Value);
            processContainer.Parameter(CoreConstantsForSpecs.Parameter.CL_SPEC_PER_ENZYME).Visible.ShouldBeFalse();
        }
コード例 #16
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        private static string createDataGroupingNameFor(bool hasOnlyOneDoseUnit, Compound compound, SchemaItemDTO schemaItemDTO)
        {
            var baseName = schemaItemDTO.DisplayName;

            if (!string.IsNullOrEmpty(compound.Name))
            {
                baseName = CoreConstants.CompositeNameFor(baseName, compound.Name);
            }

            return(hasOnlyOneDoseUnit ? baseName : Constants.NameWithUnitFor(baseName, schemaItemDTO.DoseParameter.DisplayUnit));
        }
コード例 #17
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        private string compoundProcessName(IParameter parameter)
        {
            var process     = parameter.ParentContainer;
            var processName = process.Name;

            if (process.ContainerType == ContainerType.Reaction || process.ParentContainer == null)
            {
                return(processName);
            }

            return(CoreConstants.CompositeNameFor(process.ParentContainer.Name, processName));
        }
コード例 #18
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        public void should_have_created_the_expected_number_of_columns_in_the_datatable()
        {
            _dataTable.Columns.Count.ShouldBeEqualTo(9);

            _dataTable.Columns[_xAxis.Caption].ShouldNotBeNull();
            _dataTable.Columns[CoreConstants.CompositeNameFor(PKSimConstants.UI.Minimum, _xAxis.Caption)].ShouldNotBeNull();
            _dataTable.Columns[CoreConstants.CompositeNameFor(PKSimConstants.UI.Maximum, _xAxis.Caption)].ShouldNotBeNull();
            _dataTable.Columns[PKSimConstants.UI.NumberOfIndividuals].ShouldNotBeNull();
            _dataTable.Columns[_yAxis.Caption].ShouldNotBeNull();
            _dataTable.Columns[CoreConstants.CompositeNameFor(PKSimConstants.UI.LowerPercentile, _yAxis.Caption)].ShouldNotBeNull();
            _dataTable.Columns[CoreConstants.CompositeNameFor(PKSimConstants.UI.UpperPercentile, _yAxis.Caption)].ShouldNotBeNull();
        }
コード例 #19
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        private async Task exportPopulationSimulationToCsvAsync(PopulationSimulation populationSimulation, string outputFolder, string projectName)
        {
            var populationFile         = CoreConstants.DefaultPopulationExportNameFor(populationSimulation.Name);
            var populationFileFullPath = csvPathUnder(outputFolder, populationFile, projectName);

            _populationExportTask.ExportToCSV(populationSimulation, populationFileFullPath);

            await exportSimulationResultsToCsv(populationSimulation, outputFolder, projectName);

            var populationPKAnalysesFile     = CoreConstants.DefaultPKAnalysesExportNameFor(populationSimulation.Name);
            var populationPKAnalysesFullPath = csvPathUnder(outputFolder, populationPKAnalysesFile, projectName);
            await _simulationExportTask.ExportPKAnalysesToCSVAsync(populationSimulation, populationPKAnalysesFullPath);
        }
コード例 #20
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        public IReactionBuilder TurnoverReactionFrom(IReactionBuilder templateReaction, IMoleculeBuilder protein, IReadOnlyCollection <string> forbiddenNames, IFormulaCache formulaCache)
        {
            var reaction = createReactionFromProcess(templateReaction, forbiddenNames);

            reaction.Name         = reactionNameFor(reaction.Name, protein.Name);
            reaction.Formula.Name = CoreConstants.CompositeNameFor(reaction.Name, reaction.Formula.Name);

            replaceKeywordsInProcess(reaction, new[] { CoreConstants.KeyWords.Protein, CoreConstants.KeyWords.Reaction }, new[] { protein.Name, reaction.Name });
            reaction.AddProduct(new ReactionPartnerBuilder(protein.Name, 1));

            formulaCache.Add(reaction.Formula);
            return(reaction);
        }
コード例 #21
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        private IReactionBuilder interactionReactionFrom(InteractionProcess interactionProcess, IMoleculeBuilder protein, IReadOnlyCollection <string> forbiddenNames, IFormulaCache formulaCache)
        {
            var compound     = interactionProcess.ParentCompound;
            var reactionName = CoreConstants.CompositeNameFor(compound.Name, interactionProcess.Name);
            var reaction     = createReactionFromProcess(interactionProcess, reactionName, forbiddenNames);

            //replace keywords
            replaceKeywordsInProcess(reaction, new[] { CoreConstants.KeyWords.Molecule, CoreConstants.KeyWords.Protein, CoreConstants.KeyWords.Reaction },
                                     new[] { compound.Name, protein.Name, interactionProcess.Name });

            formulaCache.Add(reaction.Formula);
            return(reaction);
        }
コード例 #22
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        protected override void AddSpecificChartColumns(DataTable dataTable, CurveData <RangeXValue, RangeYValue> curveData, bool exportForPivot)
        {
            _xValueColumn               = curveData.XAxis.Caption;
            _yValueColumn               = curveData.YAxis.Caption;
            _yLowerPercentileColumn     = CoreConstants.CompositeNameFor(PKSimConstants.UI.LowerPercentile, _yValueColumn);
            _yUpperPercentileColumn     = CoreConstants.CompositeNameFor(PKSimConstants.UI.UpperPercentile, _yValueColumn);
            _xMinimumColumn             = CoreConstants.CompositeNameFor(PKSimConstants.UI.Minimum, _xValueColumn);
            _xMaximumColumn             = CoreConstants.CompositeNameFor(PKSimConstants.UI.Maximum, _xValueColumn);
            _xNumberOfIndividualsColumn = PKSimConstants.UI.NumberOfIndividuals;

            dataTable.AddColumn <float>(_xMinimumColumn);
            dataTable.AddColumn <float>(_xValueColumn);
            dataTable.AddColumn <float>(_xMaximumColumn);
            dataTable.AddColumn <float>(_xNumberOfIndividualsColumn);
            dataTable.AddColumn <float>(_yLowerPercentileColumn);
            dataTable.AddColumn <float>(_yValueColumn);
            dataTable.AddColumn <float>(_yUpperPercentileColumn);
        }
コード例 #23
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        private void addDynamicParameterGroupNodeTo(ITreeNode node, string subGroupName, IEnumerable <IParameter> allParameters, Func <IParameter, string> keySelector, Func <string, bool> keyAvailableFunc)
        {
            var group = node.TagAsObject.DowncastTo <IGroup>();
            var allGroupParameters = _parameterGroupTask.ParametersInTopGroup(group.Name, allParameters);

            foreach (var parametersForNewGroup in allGroupParameters.GroupBy(keySelector).OrderBy(x => x.Key))
            {
                if (!keyAvailableFunc(parametersForNewGroup.Key))
                {
                    continue;
                }

                var compositeKey       = CoreConstants.CompositeNameFor(subGroupName, parametersForNewGroup.Key);
                var parameterContainer = parametersForNewGroup.First().ParentContainer;
                var dynamicNode        = _treeNodeFactory.CreateDynamicGroup(compositeKey, parametersForNewGroup.Key, parametersForNewGroup);
                dynamicNode.Icon = ApplicationIcons.IconByNameOrDefault(parameterContainer.Icon, node.Icon);
                node.AddChild(dynamicNode);
            }
        }
コード例 #24
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        protected override void TypedDeserialize(SystemicProcessSelection systemicProcessSelection, XElement element, SerializationContext context)
        {
            base.TypedDeserialize(systemicProcessSelection, element, context);
            //in 5.0.1, name of process did not contain data source.

            if (systemicProcessSelection.ProcessType == null || string.IsNullOrEmpty(systemicProcessSelection.ProcessName))
            {
                return;
            }

            var systemicProcessName = systemicProcessSelection.ProcessType.DisplayName;

            if (systemicProcessSelection.ProcessName.Contains(systemicProcessName))
            {
                return;
            }

            //we need to adjust the process name
            systemicProcessSelection.ProcessName = CoreConstants.CompositeNameFor(systemicProcessName, systemicProcessSelection.ProcessName);
        }
コード例 #25
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        protected override void AddSpecificChartColumns(DataTable dataTable, CurveData <TimeProfileXValue, TimeProfileYValue> curveData, bool exportForPivot)
        {
            _xValueColumn      = curveData.XAxis.Caption;
            _yValueColumn      = curveData.YAxis.Caption;
            _yLowerValueColumn = CoreConstants.CompositeNameFor(PKSimConstants.UI.LowerValue, _yValueColumn);
            _yUpperValueColumn = CoreConstants.CompositeNameFor(PKSimConstants.UI.UpperValue, _yValueColumn);

            //Export xValueColumn as string to enable correct pivot on x values
            if (exportForPivot)
            {
                dataTable.AddColumn <string>(_xValueColumn);
            }
            else
            {
                dataTable.AddColumn <float>(_xValueColumn);
            }

            dataTable.AddColumn <float>(_yLowerValueColumn);
            dataTable.AddColumn <float>(_yValueColumn);
            dataTable.AddColumn <float>(_yUpperValueColumn);
        }
コード例 #26
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 public void should_return_a_reaction_having_the_expected_name()
 {
     _reaction.Name.ShouldBeEqualTo(CoreConstants.CompositeNameFor(_compound.Name, _interactionProcess.Name));
 }
コード例 #27
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 public void should_have_set_the_name_of_the_kinetic_to_the_name_of_the_incoming_process_combine_with_the_name_of_the_formula()
 {
     _reaction.Formula.Name.ShouldBeEqualTo(CoreConstants.CompositeNameFor(_reaction.Name, "KINETIC"));
 }
コード例 #28
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 public void should_have_set_the_name_of_the_reaction_to_the_name_of_the_incoming_process_combine_with_the_name_of_the_drug()
 {
     _reaction.Name.ShouldBeEqualTo(CoreConstants.CompositeNameFor(_drug.Name, _process.Name));
 }
コード例 #29
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        protected override async Task Context()
        {
            await base.Context();

            _simulation = A.Fake <Simulation>().WithName("Sim");
            A.CallTo(() => _simulation.HasResults).Returns(true);
            _fileFullPath = "file full path";
            A.CallTo(() => _dialogCreator.AskForFileToSave(PKSimConstants.UI.ExportSimulationResultsToCSV, Constants.Filter.CSV_FILE_FILTER, Constants.DirectoryKey.REPORT, CoreConstants.DefaultResultsExportNameFor(_simulation.Name), null))
            .Returns(_fileFullPath);
        }
コード例 #30
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        protected override async Task Context()
        {
            await base.Context();

            _simulation = A.Fake <IndividualSimulation>();
            A.CallTo(() => _simulation.HasResults).Returns(true);
            A.CallTo(() => _simulation.Name).Returns("toto");
            A.CallTo(() => _simulation.DataRepository).Returns(new DataRepository());
            _excelFile = "tralala";
            A.CallTo(() => _dialogCreator.AskForFileToSave(PKSimConstants.UI.ExportSimulationResultsToExcel, Constants.Filter.EXCEL_SAVE_FILE_FILTER, Constants.DirectoryKey.REPORT, CoreConstants.DefaultResultsExportNameFor(_simulation.Name), null)).Returns(_excelFile);
        }