private void AddInformant(Composition header, XElement element)
{
if (header == null || element == null)
{
return;
}
foreach (var entity in element.Elements())
{
if (entity.Name.LocalName == "assignedEntity")
{
var practitioner = FromXml(new PractitionerParser(Bundle), entity);
if (practitioner != null)
{
header.AddExtension("http://hl7.org/fhir/us/ccda/StructureDefinition/CCDA-on-FHIR-Informant",
practitioner.GetResourceReference());
}
}
else if (entity.Name.LocalName == "relatedEntity")
{
var relatedPerson = FromXml(new RelatedPersonParser(Bundle), entity);
if (relatedPerson != null)
{
relatedPerson.Patient = header.Subject;
header.AddExtension("http://hl7.org/fhir/us/ccda/StructureDefinition/CCDA-on-FHIR-Informant",
relatedPerson.GetResourceReference());
}
}
}
}
public override Bundle FromXml(XElement rootElement)
{
if (rootElement == null)
{
Errors.Add(new ParserError("XML Document doesn't have a root", ParseErrorLevel.Error));
return(null);
}
// Not a CDA xml
if (rootElement.Name.LocalName != "ClinicalDocument")
{
Errors.Add(new ParserError("XML Document's root is not ClinicalDocument", ParseErrorLevel.Error));
return(null);
}
Bundle = new Bundle
{
Id = Guid.NewGuid().ToString(),
Type = Bundle.BundleType.Document
};
var header = new Composition
{
Id = Guid.NewGuid().ToString(),
Meta = new Meta(),
Status = CompositionStatus.Final
};
Bundle.AddResourceEntry(header);
foreach (var child in rootElement.Elements())
{
switch (child.Name.LocalName)
{
case "id":
Bundle.Identifier = FromXml(new IdentifierParser(), child);
break;
case "code":
AddCode(header, child);
break;
case "title":
header.Title = child.Value;
break;
case "effectiveTime":
header.DateElement = FromXml(new FhirDateTimeParser(), child);
break;
case "confidentialityCode":
var confidentialityCode = FromXml(new CodeParser(), child)?.Value;
if (!string.IsNullOrEmpty(confidentialityCode) && Enum.TryParse(confidentialityCode, true,
out Composition.ConfidentialityClassification confidentialityClassification))
{
header.Confidentiality = confidentialityClassification;
}
break;
case "languageCode":
header.Language = FromXml(new CodeParser(), child)?.Value;
break;
case "setId":
header.Identifier = FromXml(new IdentifierParser(), child);
break;
case "recordTarget":
var patient = FromXml(new PatientParser(Bundle), child.CdaElement("patientRole"));
if (patient != null)
{
header.Subject = patient.GetResourceReference();
}
break;
case "author":
AddAuthor(header, child);
break;
case "dataEnterer":
var dataEnterer = FromXml(new PractitionerParser(Bundle), child.CdaElement("assignedEntity"));
if (dataEnterer != null)
{
header.AddExtension(
"http://hl7.org/fhir/us/ccda/StructureDefinition/CCDA-on-FHIR-Data-Enterer",
dataEnterer.GetResourceReference());
}
break;
case "informant":
AddInformant(header, child);
break;
case "custodian":
var custodian = FromXml(new OrganizationParser(Bundle),
child.CdaElement("assignedCustodian")
?.CdaElement("representedCustodianOrganization"));
if (custodian != null)
{
header.Custodian = custodian.GetResourceReference();
}
break;
case "informationRecipient":
var infoRecipient = FromXml(new PractitionerParser(Bundle),
child.CdaElement("intendedRecipient"));
if (infoRecipient != null)
{
header.AddExtension(
"http://hl7.org/fhir/us/ccda/StructureDefinition/CCDA-on-FHIR-Information-Recipient",
infoRecipient.GetResourceReference());
}
break;
case "legalAuthenticator":
AddAuthenticator(header, child, Composition.CompositionAttestationMode.Legal);
break;
case "authenticator":
AddAuthenticator(header, child,
Composition.CompositionAttestationMode.Professional);
break;
case "participant":
var participant = FromXml(new RelatedPersonParser(Bundle),
child.CdaElement("associatedEntity"));
if (participant != null)
{
header.AddExtension(
"http://hl7.org/fhir/us/ccda/StructureDefinition/CCDA-on-FHIR-Participant",
participant.GetResourceReference());
}
break;
case "documentationOf":
AddServiceEvent(header, child.CdaElement("serviceEvent"));
break;
case "component":
foreach (var sectionElement in child.CdaDescendants("section"))
{
AddSection(header, sectionElement);
}
break;
}
}
if (ParserSettings.RunValidation)
{
var settings = new ValidationSettings
{
ResourceResolver = new CachedResolver(new MultiResolver(
new ZipSource("Definitions/stu3-definitions.xml.zip"),
new ZipSource("Definitions/us-core-definitions.xml.zip"),
new ZipSource("Definitions/ccda-on-fhir-definitions.xml.zip")
))
};
var validator = new Validator(settings);
var outcome = validator.Validate(Bundle);
foreach (var issue in outcome.Issue)
{
Errors.Add(new ParserError(issue.Details.Text, ParseErrorLevel.Error));
}
}
return(Bundle);
}