private void ShowBacteria(Bacterium b1, Bacterium b2)
{
var merged = BacteriaMerger.MergeBacteria(b1, b2);
BacteriaChart.Series.Add(new ScatterSeries
{
Title = merged.ToString(),
Values = new ChartValues <ObservablePoint>(merged.Points.Select(e => new ObservablePoint(e.Item1, e.Item2)))
});
var biggestX = merged.Points.Select(e => e.Item1).Max() * 1.25;
var regressionResult = new Regression(new LinearRegression()).PerformRegression(merged);
var startY = regressionResult.Regression.Transform(0);
var endY = regressionResult.Regression.Transform(biggestX);
var formula = regressionResult.Regression.ToString();
BacteriaChart.Series.Add(new LineSeries
{
Title = $"Regression line ({merged.ToString()})",
Values = new ChartValues <ObservablePoint>
{
new ObservablePoint(0, startY),
new ObservablePoint(biggestX, endY)
},
Fill = Brushes.Transparent
});
}
public Bacterium[] Division(int age, BacteriumType type)
{
Bacterium[] bacteria = new Bacterium[type.ChieldCount + type.ChieldCount];
for (int i = 0; i < bacteria.Length; i++)
{
bacteria[i] = new Bacterium(type);
}
return(bacteria);
}
public static void SendVirusGroup(VirusGroupData virusGroupData, int newVirusCount)
{
Bacterium startBacterium = _game.Bacteriums.First(x => x.Id == virusGroupData.StartBacteriumId);
Bacterium endBacterium = _game.Bacteriums.First(x => x.Id == virusGroupData.EndBacteriumId);
Road road = RoadManager.GetRoad(startBacterium.BacteriumModel, endBacterium.BacteriumModel, virusGroupData.RoadId);
_virusGroups.Add(new VirusGroup(road, startBacterium.BacteriumModel.VirusCount - newVirusCount, _virusSpeed));
startBacterium.BacteriumModel.VirusCount = newVirusCount;
}
public Dictionary <ICell, int> CountEachTypeCell()
{
var dictionary = new Dictionary <ICell, int>();
var apple = new Apple();
var chip = new Chip();
var bacterium = new Bacterium();
var slipper = new Slipper();
var cockroachTrap = new CockroachTrap();
var poison = new Poison();
dictionary[apple] = 0;
dictionary[chip] = 0;
dictionary[bacterium] = 0;
dictionary[slipper] = 0;
dictionary[cockroachTrap] = 0;
dictionary[poison] = 0;
for (int i = 0; i < size; i++)
{
for (int j = 0; j < size; j++)
{
if (cells[i][j] is Apple)
{
dictionary[apple]++;
}
if (cells[i][j] is Chip)
{
dictionary[chip]++;
}
if (cells[i][j] is Bacterium)
{
dictionary[bacterium]++;
}
if (cells[i][j] is Slipper)
{
dictionary[slipper]++;
}
if (cells[i][j] is CockroachTrap)
{
dictionary[cockroachTrap]++;
}
if (cells[i][j] is Poison)
{
dictionary[poison]++;
}
}
}
return(dictionary);
}
public Plot()
{
InitializeComponent();
ResetSeries();
AvailableBacteria = BacteriaImporter.Import(25);
ShowBacteria(AvailableBacteria[3], AvailableBacteria[12]);
ShowBacteria(AvailableBacteria[12], AvailableBacteria[3]);
Bacterium1 = AvailableBacteria[3];
Bacterium2 = AvailableBacteria[12];
DataContext = this;
}
public Bacterium[] Division(int age, BacteriumType type)
{
if ((type.LifeCycle * 2) % age == 0)
{
if (age / 2 <= type.DivisionsCount)
{
Bacterium[] bacteria = new Bacterium[type.ChieldCount];
for (int i = 0; i < bacteria.Length; i++)
{
bacteria[i] = new Bacterium(type);
}
return(bacteria);
}
}
return(null);
}
public static MergedBacteria MergeBacteria(Bacterium b1, Bacterium b2)
{
var merged = new MergedBacteria()
{
Bacterium1 = b1,
Bacterium2 = b2
};
merged.Points = new List <Tuple <double, double> >();
for (var i = 0; i < b1.Measurements.Count; i++)
{
merged.Points.Add(new Tuple <double, double>(b1.Measurements[i], b2.Measurements[i]));
}
merged.CosineDistance = 1 - Distance.Cosine(b1.Measurements.ToArray(), b2.Measurements.ToArray());
merged.SpearmanCorrelation = Correlation.Spearman(b1.Measurements, b2.Measurements);
merged.PearsonCorrelation = Correlation.Pearson(b1.Measurements, b2.Measurements);
return(merged);
}
static void PrintResult(string title, Bacterium bacterium, RegressionResult result)
{
double matchSum = 0;
Console.WriteLine("\n");
Console.WriteLine($"{title} on {bacterium.ASV}. Used {result.FormulaUsed}");
for (var i = 0; i < result.TestY.Length; i++)
{
var match = GetMatch(result.TestX[i], result.PredictionOnTestSet[i]);
Console.WriteLine(String.Format("Timestamp {0} is {1:0.00} and predicted {2:0.00}. Prediction is {3:0.0000}% of actual value",
result.TestY[i],
result.TestX[i],
result.PredictionOnTestSet[i],
match
));
matchSum += match;
}
var matchAverage = matchSum / result.TestY.Length;
Console.WriteLine($"Error on training set: {result.Error}");
Console.WriteLine($"Average match on test set (closer to 100 is better): {Math.Round(matchAverage, 4)}");
}
private void Update()
{
if (SelectedBacteriums.Count == 0)
{
return;
}
if (Input.GetKeyUp(KeyCode.Mouse0))
{
Collider2D bacteriumColider = Physics2D.OverlapPoint(MousePosition);
if (bacteriumColider != null)
{
Bacterium bacterium = bacteriumColider.GetComponent <Bacterium>();
GameManager.RequestSendViruses(SelectedBacteriums.Select(x => x.Id), bacterium.Id);
}
foreach (Bacterium bacterium in SelectedBacteriums)
{
bacterium.CleanLine();
}
SelectedBacteriums.Clear();
}
}
public static void SendVirusGroupArrived(int bacteriumId, int newVirusCount)
{
Bacterium bacterium = _game.Bacteriums.First(x => x.Id == bacteriumId);
bacterium.BacteriumModel.VirusCount = newVirusCount;
}
