internal static void ExampleAutoSetup()
{
FuncCallBack2 oFunc2 = FunctionCallback2;
StpntCallBack oStpnt = StpntCallback;
BcndCallBack oBcnd = BoundaryCallback;
AutoInterface.SetAutoNumParameters(36);
AutoInterface.setCallbackFunc2(oFunc2);
AutoInterface.setCallbackStpnt(oStpnt);
AutoInterface.setCallbackBcnd(oBcnd);
}
static void Main(string[] args)
{
FuncCallBack2 oFunc2 = new FuncCallBack2(FunctionCallback2);
StpntCallBack oStpnt = new StpntCallBack(StpntCallback);
BcndCallBack oBcnd = new BcndCallBack(BoundaryCallback);
//AutoInterface.SetAutoNumParameters(36);
AutoInterface.setCallbackFunc2(oFunc2);
AutoInterface.setCallbackStpnt(oStpnt);
AutoInterface.setCallbackBcnd(oBcnd);
//AutoInterface.setFort2File(global::AutoTorCSharp.Properties.Resources.fort, global::AutoTorCSharp.Properties.Resources.fort.Length);
AutoInterface.CallAuto();
int nLength = 0;
string sResult = AutoInterface.getFort7File(out nLength);
Console.WriteLine(sResult);
//Console.WriteLine("done!");
}
internal void SetupUsingModel(IModel oCurrentModel)
{
if (oCurrentModel == null)
{
throw new ArgumentNullException("oCurrentModel", "Need to load SBML file first.");
}
setupControl1.CurrentConfig.NDIM = oCurrentModel.y.Length;
_InitializationCallBack = ModelInitializationCallback;
_FunctionCallBack = ModelFunctionCallback;
//_BCNDCallBack = new BcndCallBack(ModelBcndCallBack);
//_IcndCallBack = new IcndCallBack(ModelIcndCallBack);
//_FoptCallBack = new FoptCallBack(ModelFoptCallBack);
//_PvlsCallBack = new PvlsCallBack(ModelPvlsCallBack);
AutoInterface.setCallbackStpnt(_InitializationCallBack);
AutoInterface.setCallbackFunc2(_FunctionCallBack);
//AutoInterface.setCallbackBcnd(_BCNDCallBack);
//AutoInterface.setCallbackIcnd(_IcndCallBack);
//AutoInterface.setCallbackFopt(_FoptCallBack);
//AutoInterface.setCallbackPvls(_PvlsCallBack);
}
private void RunContinuationForTripple(IntTripple tripple)
{
try
{
if (SBML == null || SBML.Length == 0)
{
return;
}
string fort8 = AutoResult.NewFort8; //.Replace(" 7 ", " 12 ");
//string fort7 = AutoResult.NewFort7;
ResetAuto();
setupControl1.RunContinuation = true;
setupControl1.Label = tripple.Value1;
string originalConfig = setupControl1.CurrentConfig.ToInputString();
//setupControl1.CurrentConfig.IPS = 2;
setupControl1.CurrentConfig.IRS = tripple.Value1;
//setupControl1.CurrentConfig.ILP = 1;
setupControl1.CurrentConfig.NICP = 2;
setupControl1.CurrentConfig.ICP.Clear();
setupControl1.CurrentConfig.ICP.Add(0);
setupControl1.CurrentConfig.ICP.Add(10);
//setupControl1.CurrentConfig.NCOL = 4;
//setupControl1.CurrentConfig.IAD = 3;
//setupControl1.CurrentConfig.ISP = 1;
//setupControl1.CurrentConfig.ISW = 1;
setupControl1.CurrentConfig.MXBF = 10;
setupControl1.CurrentConfig.NTHL = 1;
setupControl1.CurrentConfig.THL.Add(new IntDoublePair(10, 0));
txtConfig.Text = setupControl1.Configuration;
SetupAuto();
AutoInterface.setFort2File(txtConfig.Text, txtConfig.Text.Length);
AutoInterface.setFort3File(fort8, fort8.Length);
if (setupControl1.CurrentConfig.IPS != 1)
{
if (
MessageBox.Show(
"Currently only IPS = 1 is supported, any other value will make the library unstable. It is recommendet that you Quit (yes).",
"Unsupported Values", MessageBoxButtons.YesNo, MessageBoxIcon.Question) == DialogResult.Yes)
{
return;
}
}
AutoInterface.CallAuto();
string lastMessage = AutoInterface.GetLastMessage();
//fort7 = fort7 + AutoResult.NewFort7;
//AutoInterface.setFort7File(fort7, fort7.Length);
fort8 = fort8 + AutoResult.NewFort8;
AutoInterface.setFort8File(fort8, fort8.Length);
CurrentResult = new AutoResult();
txtResult.Text = CurrentResult.Fort7;
RemoveWartermark();
if (CurrentResult.ErrorOccured && CurrentResult.NumPoints < 10)
{
AddWaterMark("Auto\ndid not\nreturn\nresults.");
}
else if (CurrentResult.NumPoints < 10)
{
AddWaterMark("Not\nenough\npoints\nreturned.");
}
setupControl1.CurrentConfig = AutoInputConstants.FromContent(originalConfig);
if (!string.IsNullOrEmpty(lastMessage))
{
RemoveWartermark();
AddWaterMark(lastMessage);
return;
}
PlotResults(CurrentResult);
if (setupControl1.ReloadAfterRun)
{
try
{
//Simulator.loadSBML(SBML);
cmdSendToAuto_Click(this, EventArgs.Empty);
}
catch (Exception)
{
//
}
}
}
catch (Exception ex)
{
MessageBox.Show(ex.Message, "An Error occured while running Auto", MessageBoxButtons.OK,
MessageBoxIcon.Error);
}
}
internal void RunAuto()
{
Cursor originalCursor = Cursor;
try
{
Cursor = Cursors.WaitCursor;
if (string.IsNullOrEmpty(SBML))
{
OpenSBML();
}
ResetAuto();
setupControl1.RunContinuation = false;
SetupAuto();
AutoInterface.setFort2File(txtConfig.Text, txtConfig.Text.Length);
if (setupControl1.CurrentConfig.IPS != 1)
{
if (
MessageBox.Show(
"Currently only IPS = 1 is supported, any other value will make the library unstable. It is recommendet that you Quit (yes).",
"Unsupported Values", MessageBoxButtons.YesNo, MessageBoxIcon.Question) == DialogResult.Yes)
{
return;
}
}
AutoInterface.CallAuto();
CurrentResult = new AutoResult();
txtResult.Text = CurrentResult.Fort7;
RemoveWartermark();
if (CurrentResult.ErrorOccured)
{
AddWaterMark("Auto\ndid not\nreturn\nresults.");
}
else if (CurrentResult.NumPoints < 10)
{
AddWaterMark("Not\nenough\npoints\nreturned.");
}
PlotResults(CurrentResult);
//if (setupControl1.ReloadAfterRun)
//{
// try
// {
// //Simulator.loadSBML(SBML);
// cmdSendToAuto_Click(this, EventArgs.Empty);
// }
// catch (Exception)
// {
// //
// }
//}
}
catch (Exception ex)
{
MessageBox.Show(ex.Message, "An Error occured while running Auto", MessageBoxButtons.OK,
MessageBoxIcon.Error);
}
finally
{
Cursor = originalCursor;
}
}
