public RigidRegistration(sitk.Image fixedImage, sitk.Image movingImage, RegistrationParameters parameters) : base(parameters)
{
this.fixedImage = ImageUtils.CastImageToFloat32(fixedImage);
this.movingImage = ImageUtils.CastImageToFloat32(movingImage);
this.registrationParameters = parameters;
elastix = new sitk.ElastixImageFilter();
if (parameterMap == null)
{
parameterMap = RegistrationUtils.GetDefaultParameterMap(parameters.RegistrationDefaultParams);
}
// set output dir
outputDirectory = Path.Combine(registrationParameters.OutputDirectory, registrationParameters.Iteration.ToString());
if (!Directory.Exists(outputDirectory))
{
Directory.CreateDirectory(outputDirectory);
}
elastix.SetOutputDirectory(outputDirectory);
//elastix.SetLogFileName(Path.Combine(outputDirectory, registrationParameters.ElastixLogFileName));
elastix.LogToFileOn();
//base.SetGeneralParameters();
}
public MultipleParameterFileRegistration(sitk.Image fixedImage, sitk.Image movingImage, RegistrationParameters parameters) : base(parameters)
{
this.fixedImage = ImageUtils.CastImageToFloat32(fixedImage);
this.movingImage = ImageUtils.CastImageToFloat32(movingImage);
elastix = new sitk.ElastixImageFilter();
for (int i = 0; i < parameters.ParameterFiles.Count; i++)
{
if (i == 0)
{
elastix.SetParameterMap(elastix.ReadParameterFile(parameters.ParameterFiles[i]));
}
else
{
elastix.AddParameterMap(elastix.ReadParameterFile(parameters.ParameterFiles[i]));
}
}
// set output dir
outputDirectory = Path.Combine(registrationParameters.OutputDirectory, "multiple_" + DateTime.Now.ToShortDateString());
if (!Directory.Exists(outputDirectory))
{
Directory.CreateDirectory(outputDirectory);
}
elastix.SetOutputDirectory(outputDirectory);
//elastix.SetLogFileName(Path.Combine(outputDirectory, registrationParameters.ElastixLogFileName));
elastix.LogToFileOn();
}