public void TestSchemaUpdater()
{
Assert.AreEqual(18, SchemaUpdater.CurrentSchemaRevision);
var testModel = new TestModel()
{
TestContext = TestContext
};
TestModel.ClassInitialize(TestContext);
testModel.TestInitialize();
testModelFile(testModel, "testModel.idpDB");
string filename = null;
// test all revisions without a data filter applied
// we don't need to test upgrade from 5 to 6; it simply forces reapplication of the basic filters
// we don't need to test upgrade from 4 to 5; it's a simple null value fix
filename = "testModel-v4.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 4);
testModelFile(testModel, filename);
filename = "testModel-v3.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 3);
testModelFile(testModel, filename);
filename = "testModel-v2.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 2);
testModelFile(testModel, filename);
filename = "testModel-v1.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 1);
testModelFile(testModel, filename);
filename = "testModel-v0.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 0);
testModelFile(testModel, filename);
// test all revisions with a data filter applied (only check that the update worked this time)
File.Copy("testModel.idpDB", "testFilter.idpDB", true);
var dataFilter = new DataFilter {
MaximumQValue = 1
};
using (var sessionFactory = SessionFactoryFactory.CreateSessionFactory("testFilter.idpDB"))
using (var session = testModel.session = sessionFactory.OpenSession())
{
dataFilter.ApplyBasicFilters(session);
}
filename = "testFilter-v4.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 4);
testFilterFile(filename);
filename = "testFilter-v3.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 3);
testFilterFile(filename);
filename = "testFilter-v2.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 2);
testFilterFile(filename);
filename = "testFilter-v1.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 1);
testFilterFile(filename);
filename = "testFilter-v0.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 0);
testFilterFile(filename);
}
public void TestSchemaUpdater()
{
Assert.AreEqual(15, SchemaUpdater.CurrentSchemaRevision);
var testModel = new TestModel() { TestContext = TestContext };
TestModel.ClassInitialize(TestContext);
testModel.TestInitialize();
testModelFile(testModel, "testModel.idpDB");
string filename = null;
// test all revisions without a data filter applied
// we don't need to test upgrade from 12 to 13; the extra table (PeptideModificationProbability) is ignored and necessary for the current NHibernate bindings
// we don't need to test upgrade from 11 to 12; the changed table (XICMetrics) is ignored
// we don't need to test upgrade from 10 to 11; the extra columns (GeneGroups, Genes) are ignored
// we don't need to test upgrade from 9 to 10; the extra tables (XICMetrics, XICMetricsSettings) are ignored
// we don't need to test upgrade from 8 to 9; the extra columns (GeneLevelFiltering, DistinctMatchFormat) are ignored
// we don't need to test upgrade from 7 to 8; the extra columns are ignored
// we don't need to test upgrade from 5 to 6; it simply forces reapplication of the basic filters
// we don't need to test upgrade from 4 to 5; it's a simple null value fix
filename = "testModel-v4.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 4);
testModelFile(testModel, filename);
filename = "testModel-v3.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 3);
testModelFile(testModel, filename);
filename = "testModel-v2.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 2);
testModelFile(testModel, filename);
filename = "testModel-v1.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 1);
testModelFile(testModel, filename);
filename = "testModel-v0.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 0);
testModelFile(testModel, filename);
// test all revisions with a data filter applied (only check that the update worked this time)
File.Copy("testModel.idpDB", "testFilter.idpDB", true);
var dataFilter = new DataFilter { MaximumQValue = 1 };
using (var sessionFactory = SessionFactoryFactory.CreateSessionFactory("testFilter.idpDB"))
using (var session = testModel.session = sessionFactory.OpenSession())
{
dataFilter.ApplyBasicFilters(session);
}
filename = "testFilter-v4.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 4);
testFilterFile(filename);
filename = "testFilter-v3.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 3);
testFilterFile(filename);
filename = "testFilter-v2.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 2);
testFilterFile(filename);
filename = "testFilter-v1.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 1);
testFilterFile(filename);
filename = "testFilter-v0.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 0);
testFilterFile(filename);
}
public void TestSchemaUpdater()
{
Assert.AreEqual(15, SchemaUpdater.CurrentSchemaRevision);
var testModel = new TestModel()
{
TestContext = TestContext
};
TestModel.ClassInitialize(TestContext);
testModel.TestInitialize();
testModelFile(testModel, "testModel.idpDB");
string filename = null;
// test all revisions without a data filter applied
// we don't need to test upgrade from 12 to 13; the extra table (PeptideModificationProbability) is ignored and necessary for the current NHibernate bindings
// we don't need to test upgrade from 11 to 12; the changed table (XICMetrics) is ignored
// we don't need to test upgrade from 10 to 11; the extra columns (GeneGroups, Genes) are ignored
// we don't need to test upgrade from 9 to 10; the extra tables (XICMetrics, XICMetricsSettings) are ignored
// we don't need to test upgrade from 8 to 9; the extra columns (GeneLevelFiltering, DistinctMatchFormat) are ignored
// we don't need to test upgrade from 7 to 8; the extra columns are ignored
// we don't need to test upgrade from 5 to 6; it simply forces reapplication of the basic filters
// we don't need to test upgrade from 4 to 5; it's a simple null value fix
filename = "testModel-v4.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 4);
testModelFile(testModel, filename);
filename = "testModel-v3.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 3);
testModelFile(testModel, filename);
filename = "testModel-v2.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 2);
testModelFile(testModel, filename);
filename = "testModel-v1.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 1);
testModelFile(testModel, filename);
filename = "testModel-v0.idpDB";
File.Copy("testModel.idpDB", filename, true);
downgradeToRevision(filename, 0);
testModelFile(testModel, filename);
// test all revisions with a data filter applied (only check that the update worked this time)
File.Copy("testModel.idpDB", "testFilter.idpDB", true);
var dataFilter = new DataFilter {
MaximumQValue = 1
};
using (var sessionFactory = SessionFactoryFactory.CreateSessionFactory("testFilter.idpDB"))
using (var session = testModel.session = sessionFactory.OpenSession())
{
dataFilter.ApplyBasicFilters(session);
}
filename = "testFilter-v4.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 4);
testFilterFile(filename);
filename = "testFilter-v3.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 3);
testFilterFile(filename);
filename = "testFilter-v2.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 2);
testFilterFile(filename);
filename = "testFilter-v1.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 1);
testFilterFile(filename);
filename = "testFilter-v0.idpDB";
File.Copy("testFilter.idpDB", filename, true);
downgradeToRevision(filename, 0);
testFilterFile(filename);
}
