public IPdb(string filename, bool multimeric)
{
int lineCount = 0;
//Check to see if the file needs decomrpession (this is the case for full PDB scans)
if (filename.Substring(filename.Length - 3, 3) == ".gz") {
IGzip gzip = new IGzip();
string PdbDecompressed = gzip.Decompress(filename);
gzip = null;
//Console.WriteLine("Filename: " + filename);
string[] lines = PdbDecompressed.Split('\n');
foreach (string line in lines) {
ParseLine(line);
lineCount++;
}
}
//Standard PDB (already unzipped)
else {
StreamReader PdbFile = File.OpenText(filename);
string line = PdbFile.ReadLine();
while (line != null) {
ParseLine(line);
line = PdbFile.ReadLine();
lineCount++;
}
PdbFile.Close();
}
this.filesize = lineCount;
this.PdbCode = ParsePdbCode(filename, multimeric);
}
public IPdb(string filename, bool multimeric)
{
int lineCount = 0;
//Check to see if the file needs decomrpession (this is the case for full PDB scans)
if (filename.Substring(filename.Length - 3, 3) == ".gz")
{
IGzip gzip = new IGzip();
string PdbDecompressed = gzip.Decompress(filename);
gzip = null;
//Console.WriteLine("Filename: " + filename);
string[] lines = PdbDecompressed.Split('\n');
foreach (string line in lines)
{
ParseLine(line);
lineCount++;
}
}
//Standard PDB (already unzipped)
else
{
StreamReader PdbFile = File.OpenText(filename);
string line = PdbFile.ReadLine();
while (line != null)
{
ParseLine(line);
line = PdbFile.ReadLine();
lineCount++;
}
PdbFile.Close();
}
this.filesize = lineCount;
this.PdbCode = ParsePdbCode(filename, multimeric);
}
