public static TempSpec Sum(TempSpec spec1, TempSpec spec2, double rv1, double rv2)
{
if (spec1.Length != spec2.Length)
{
return(null);
}
TempSpec specSum = new TempSpec(spec1.Length);
LinInterpolator li1 = new LinInterpolator(spec1.lambs, spec1.norm_intes);
LinInterpolator li2 = new LinInterpolator(spec2.lambs, spec2.norm_intes);
LinInterpolator liCont1 = new LinInterpolator(spec1.lambs, spec1.cont);
LinInterpolator liCont2 = new LinInterpolator(spec2.lambs, spec2.cont);
double lambda1 = spec1.Lambdas[0];
double lambda2 = spec1.Lambdas[spec1.Length - 1];
double dlambda = (lambda2 - lambda1) / spec1.Length;
double c = 299792.458;
double lambda, cont1, cont2;
for (int i = 0; i < specSum.Length; i++)
{
lambda = lambda1 + i * dlambda;
specSum.lambs[i] = lambda;
cont1 = liCont1.InterpUni(lambda - lambda * rv1 / c);
cont2 = liCont2.InterpUni(lambda - lambda * rv2 / c);
specSum.cont[i] = cont1 + cont2;
specSum.norm_intes[i] = (li1.InterpUni(lambda - lambda * rv1 / c) * cont1 +
li2.InterpUni(lambda - lambda * rv2 / c) * cont2) / specSum.cont[i];
}
return(specSum);
}
private void DrawObsSpecGraph()
{
int n = lbOrders.SelectedIndex;
if (n == -1)
{
return;
}
double lam_min = lambds[n].First();
double lam_max = lambds[n].Last();
if (lam_min > lam_max)
{
double buff;
buff = lam_max;
lam_max = lam_min;
lam_min = buff;
}
plot.Clear();
if (tellur != null)
{
for (int i = 0; i < tellur.Size(); i++)
{
if (tellur.GetLeftBound(i) > lam_min && tellur.GetRightBound(i) < lam_max)
{
VerticalLine vl1 = new VerticalLine(tellur.GetLeftBound(i));
VerticalLine vl2 = new VerticalLine(tellur.GetRightBound(i));
FilledRegion fr = new FilledRegion(vl1, vl2);
fr.Brush = Brushes.LightBlue;
plot.Add(fr);
}
}
}
for (int i = 0; i < cutMask.Size(); i++)
{
if (cutMask.GetLeftBound(i) > lam_min && cutMask.GetRightBound(i) < lam_max)
{
VerticalLine vl1 = new VerticalLine(cutMask.GetLeftBound(i));
VerticalLine vl2 = new VerticalLine(cutMask.GetRightBound(i));
FilledRegion fr = new FilledRegion(vl1, vl2);
fr.Brush = Brushes.Coral;
plot.Add(fr);
}
}
LinePlot lp = new LinePlot();
lp.AbscissaData = this.lambds[n];
lp.OrdinateData = this.fluxes[n];
plot.Add(lp);
if (this.cont != null)
{
int nums = lambds[0].Length;
LinePlot lp0 = new LinePlot();
lp0.AbscissaData = this.lambds[n];
lp0.OrdinateData = this.cont[n];
lp0.Color = Color.Green;
plot.Add(lp0);
if (this.tspec != null)
{
li = new LinInterpolator(tspec.Lambdas, tspec.NormFluxes);
double[] ll = new double[nums];
double[] ff = new double[nums];
for (int i = 0; i < nums; i++)
{
ll[i] = lambds[n][i];
ff[i] = li.InterpUni(ll[i]) * cont[n][i];
}
LinePlot lp1 = new LinePlot();
lp1.AbscissaData = ll;
lp1.OrdinateData = ff;
lp1.Color = Color.Red;
plot.Add(lp1);
}
}
plot.AddInteraction(new NPlot.Windows.PlotSurface2D.Interactions.HorizontalDrag());
plot.AddInteraction(new NPlot.Windows.PlotSurface2D.Interactions.VerticalDrag());
plot.AddInteraction(new NPlot.Windows.PlotSurface2D.Interactions.AxisDrag(true));
plot.XAxis1.Label = "Wavelength";
plot.YAxis1.Label = "Flux";
plot.Show();
plot.Refresh();
}
private void btnStart_Click(object sender, EventArgs e)
{
int oo, ox, grading_step;
try
{
oo = int.Parse(txtOrderO.Text,
System.Globalization.CultureInfo.InvariantCulture);
ox = int.Parse(txtOrderX.Text,
System.Globalization.CultureInfo.InvariantCulture);
grading_step = int.Parse(txtGradingStep.Text,
System.Globalization.CultureInfo.InvariantCulture);
}
catch
{
MessageBox.Show("Some error in input parameters...", "Error...");
return;
}
if (this.lambds == null)
{
MessageBox.Show("Load observed spectra...", "Error...");
return;
}
this.cont = null;
this.files = null;
if (rbTemplate.Checked)
{
if (rbCompTwo.Checked)
{
double rv1, rv2;
try
{
rv1 = double.Parse(txtRV1.Text.Replace(",", "."),
System.Globalization.CultureInfo.InvariantCulture);
rv2 = double.Parse(txtRV2.Text.Replace(",", "."),
System.Globalization.CultureInfo.InvariantCulture);
}
catch
{
MessageBox.Show("Some error in RV1 or RV2 fields...", "Error...");
return;
}
try
{
tspec1 = new TempSpec(txtTemplate1.Text);
}
catch
{
MessageBox.Show("Cannot load Template 1 file...", "Error...");
return;
}
try
{
tspec2 = new TempSpec(txtTemplate2.Text);
}
catch
{
MessageBox.Show("Cannot load Template 2 file...", "Error...");
return;
}
tspec = TempSpec.Sum(tspec1, tspec2, rv1, rv2);
}
else
{
double rv;
try
{
rv = double.Parse(txtRV1.Text.Replace(",", "."),
System.Globalization.CultureInfo.InvariantCulture);
}
catch
{
MessageBox.Show("Some error in RV1 field...", "Error...");
return;
}
try
{
tspec1 = new TempSpec(txtTemplate1.Text);
}
catch
{
MessageBox.Show("Cannot load Template 1 file...", "Error...");
return;
}
tspec = tspec1.RVShift(rv);
}
}
tellur = new Mask(Application.StartupPath + "\\telluric.txt");
double[][] mask = new double[tellur.Size() + cutMask.Size()][];
for (int i = 0; i < mask.Length; i++)
{
mask[i] = new double[2];
}
for (int i = 0; i < tellur.Size(); i++)
{
mask[i][0] = tellur.GetLeftBound(i);
mask[i][1] = tellur.GetRightBound(i);
}
for (int i = 0; i < cutMask.Size(); i++)
{
mask[i + tellur.Size()][0] = cutMask.GetLeftBound(i);
mask[i + tellur.Size()][1] = cutMask.GetRightBound(i);
}
double[][] lambds1, fluxes1;
double[][][] outmas = null;
if (grading_step > 1)
{
outmas = SpectraGrading(grading_step);
}
lambds1 = outmas[0];
fluxes1 = outmas[1];
Normator norm = null;
if (rbTemplate.Checked)
{
norm = new Normator(lambds1, fluxes1, tspec.Lambdas, tspec.NormFluxes, mask);
}
else
{
norm = new Normator(lambds1, fluxes1, mask);
}
norm.Norm1(oo, ox, 10);
this.cont = new double[this.lambds.Length][];
for (int i = 0; i < this.cont.Length; i++)
{
this.cont[i] = new double[this.lambds[i].Length];
}
for (int i = 0; i < this.cont.Length; i++)
{
Array.Reverse(lambds1[i]);
Array.Reverse(norm.GetContinum[i]);
LinInterpolator li = new LinInterpolator(lambds1[i], norm.GetContinum[i]);
for (int j = 0; j < this.cont[i].Length; j++)
{
this.cont[i][j] = li.Interp(this.lambds[i][j]);
}
}
}
public void Norm1(int oo, int ox, int iterMax)
{
ord_x = ox;
ord_o = oo;
n_orders = this.lambds.Length;
n_pixels = this.lambds[0].Length;
if (this.lambds_temp != null)
{
li = new LinInterpolator(lambds_temp, intes_temp);
}
double[] fluxes_norm = new double[n_orders * n_pixels];
double[] sigmas = new double[n_orders * n_pixels];
double[][] xx = new double[n_orders * n_pixels][];
for (int i = 0; i < xx.Length; i++)
{
xx[i] = new double[2];
}
max_flux = this.fluxes[0][0];
for (int i = 0; i < n_orders; i++)
{
for (int j = 0; j < n_pixels; j++)
{
if (max_flux < fluxes[i][j])
{
max_flux = fluxes[i][j];
}
}
}
// Removing regions in observed spectra according the mask;
int k = 0;
for (int n = 0; n < n_orders; n++)
{
for (int i = 0; i < n_pixels; i++)
{
bool notInMask = true;
for (int s = 0; s < mask.Length; s++)
{
if (lambds[n][i] >= mask[s][0] && lambds[n][i] <= mask[s][1])
{
notInMask = false;
}
}
if (notInMask)
{
fluxes_norm[k] = fluxes[n][i] / max_flux;
if (fluxes_norm[k] > 0)
{
sigmas[k] = Math.Sqrt(fluxes_norm[k]);
}
else
{
sigmas[k] = 1e20;
}
xx[k][0] = (double)n / n_orders;
xx[k][1] = (double)i / n_pixels;
k++;
}
}
}
Array.Resize(ref xx, k);
Array.Resize(ref fluxes_norm, k);
// Fitting the model spectra to observed spectra;
FitSVD.fit_finctions_md func = new FitSVD.fit_finctions_md(Pars);
FitSVD fitter = new FitSVD(xx, fluxes_norm, sigmas, func, 1e-20);
double stderror;
int rejected_poins_number = 0;
for (int i = 0; i < 1; i++)
{
fitter.fit();
coeff = fitter.FittedCoeffs;
stderror = 0;
//for (int j = 0; j < points_number; j++)
//{
// stderror += Math.Pow(point_lambda[j] - Surface(coeff, point_order[j], point_pixel[j], oo, ox), 2);
//}
//stderror = Math.Sqrt(stderror / points_number);
//double diff;
//int k = 0;
//for (int j = 0; j < points_number; j++)
//{
// diff = Math.Abs(point_lambda[j] - Surface(coeff, point_order[j], point_pixel[j], oo, ox));
// if (diff < cutLimit * stderror)
// {
// point_lambda[k] = point_lambda[j];
// point_order[k] = point_order[j];
// point_pixel[k] = point_pixel[j];
// k++;
// }
// else
// {
// rejected_poins_number++;
// }
//}
//points_number = k;
}
cont = new double[n_orders][];
for (int i = 0; i < cont.Length; i++)
{
cont[i] = new double[n_pixels];
}
for (int i = 0; i < n_orders; i++)
{
for (int j = 0; j < n_pixels; j++)
{
cont[i][j] = Surface(coeff, (double)i / n_orders,
(double)j / n_pixels, oo, ox) * max_flux;
}
}
}