public Chromosome deepCopy()
{
string previousString = HumanReadableChromosome();
Chromosome ret = new Chromosome();
ret.cells = new List <Cell>();
ret.classBits = new BitArray(classBits);
ret.affinityBits = new BitArray(affinityBits);
foreach (Cell x in cells)
{
ret.AddCell(x.DeepCopy());
}
ret.updateCellNum();
ret.notFlag = NotFlag;
string newString = ret.HumanReadableChromosome();
Debug.Assert(newString == previousString);
return(ret);
}
internal static Chromosome ChromosomeFromHumanReadableChromosome(string hrc)
{
StringReader sin = new StringReader(hrc);
Chromosome ret = new Chromosome();
ret.cells = new List <Cell>();
bool success = false;
string affinity = sin.ReadLine().Trim();
for (int i = 0; i < 4; ++i)
{
if (affinity == affinityStrings[i])
{
ret.affinityBits = MyUtils.Util.BitsFromInt(2, i);
success = true;
break;
}
}
if (success)
{
sin.ReadLine();
string classStr = sin.ReadLine().Trim();
int classInt = OptoGlobals.ClassDict[classStr];
ret.classBits = Util.BitsFromInt(Chromosome.ClassBitLength, classInt);
}
string line = sin.ReadLine();
ret.notFlag = line.Contains("nay");
string [] tokens = { "This cell" }, cellStrings;
cellStrings = hrc.Split(tokens, StringSplitOptions.RemoveEmptyEntries);
for (int i = 1; i < cellStrings.Length; ++i)
{
ret.AddCell(Cell.CellFromHumanReadableCell(cellStrings[i]));
}
return(ret);
}
