public void TestInitialize()
{
mockServiceLocator = new Mock<IServiceLocator>();
mockPeptideDataProvider = new Mock<IPeptideDataProvider>();
peptides = new Peptides(@"C:\temp\Data\peptides.xml", mockServiceLocator.Object);
}
public void Save()
{
peptides = Peptides.Open(Properties.Settings.Default.XmlPeptideTestFile);
peptides.PeptideCollection[0].Sequence = "SAMPLE";
peptides.Location = @"C:\temp\peptides.xml";
peptides.Save();
peptides = Peptides.Open(@"C:\temp\peptides.xml");
Assert.AreEqual("SAMPLE", peptides.PeptideCollection[0].Sequence);
}
public void Open()
{
peptides = Peptides.Open(Properties.Settings.Default.XmlPeptideTestFile);
Assert.AreEqual(Properties.Settings.Default.XmlPeptideTestFile, peptides.Location);
Assert.AreEqual(5, peptides.PeptideCollection.Count);
Assert.AreEqual("DGIPSKVQRCAVG", peptides.PeptideCollection[0].Sequence);
Assert.AreEqual("NENERYDAVQHCRYVDE", peptides.PeptideCollection[1].Sequence);
Assert.AreEqual("VAHDDIPYSSAGSDDVYKHIKEAGM", peptides.PeptideCollection[2].Sequence);
Assert.AreEqual("RIVRDYDVYA", peptides.PeptideCollection[3].Sequence);
Assert.AreEqual("LNVSF", peptides.PeptideCollection[4].Sequence);
}
public Experiment(string name, ProjectBase project, IExperimentType experimentType)
: base(name, project, experimentType)
{
_peptideFileLocation = @"Data\Peptides.xml";
_peptides = new Peptides(Path.Combine(Path.GetDirectoryName(Location), PeptidesFileLocation));
}