private void dToolStripMenuItem_Click(object sender, EventArgs e)
{
cFeedBackMessage MessageReturned;
cGUI_ListClasses GUI_ListClasses = new cGUI_ListClasses();
GUI_ListClasses.IsCheckBoxes = true;
GUI_ListClasses.IsSelectAll = true;
if (GUI_ListClasses.Run().IsSucceed == false) return;
cExtendedList ListClassSelected = GUI_ListClasses.GetOutPut()[0];
List<cWellClassType> ListWellClassesSelected = new List<cWellClassType>();
foreach (var item in ListClassSelected.ListTags)
{
ListWellClassesSelected.Add((cWellClassType)(item));
}
cViewerGraph1D V1D = new cViewerGraph1D();
V1D.Chart.IsSelectable = true;
V1D.Chart.LabelAxisX = "Well Index";
V1D.Chart.LabelAxisY = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
V1D.Chart.IsXGrid = true;
if (ProcessModeCurrentPlateOnlyToolStripMenuItem.Checked)
{
cExtendedTable DataFromPlate = new cExtendedTable(cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate().ListActiveWells,
cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx, ListClassSelected);
DataFromPlate.Name = cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate().GetName();
V1D.Chart.IsShadow = true;
V1D.Chart.IsBorder = true;
//V1D.Chart.IsSelectable = true;
V1D.Chart.CurrentTitle.Tag = cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate();
V1D.SetInputData(DataFromPlate);
V1D.Run();
cDesignerSplitter DS = new cDesignerSplitter();
DS.Orientation = System.Windows.Forms.Orientation.Horizontal;
DS.SetInputData(V1D.GetOutPut());
cExtendedTable NewTable = cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate().ListActiveWells.Filter(ListWellClassesSelected).GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = "Histogram";
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Run();
DS.SetInputData(CV1.GetOutPut());
DS.Run();
cDisplayToWindow Disp0 = new cDisplayToWindow();
Disp0.SetInputData(DS.GetOutPut());
Disp0.Title = "Scatter points graph - " + DataFromPlate[0].Count + " wells.";
if (!Disp0.Run().IsSucceed) return;
Disp0.Display();
}
else if (ProcessModeEntireScreeningToolStripMenuItem.Checked)
{
V1D.Chart.MarkerSize = 5;
V1D.Chart.IsBorder = false;
V1D.Chart.IsShadow = false;
cListWells ListWell = new cListWells(null);
int IdxWellForPlateSeparator = 0;
foreach (cPlate TmpPlate in cGlobalInfo.CurrentScreening.ListPlatesActive)
{
foreach (cWell TmpWell in TmpPlate.ListActiveWells)
{
int ClassTmp = TmpWell.GetCurrentClassIdx();
if ((ClassTmp == -1) || (GUI_ListClasses.GetOutPut()[0][TmpWell.GetCurrentClassIdx()] == 0)) continue;
ListWell.Add(TmpWell);
IdxWellForPlateSeparator++;
}
if (cGlobalInfo.OptionsWindow.FFAllOptions.checkBoxDisplayPlatesVerticalLines.Checked)
{
Classes.Base_Classes.General.cLineVerticalForGraph VL = new Classes.Base_Classes.General.cLineVerticalForGraph(IdxWellForPlateSeparator + 0.5);
VL.IsAllowMoving = false;
V1D.Chart.ListVerticalLines.Add(VL);
}
}
cExtendedTable DataFromPlate = new cExtendedTable(ListWell,
cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx, ListClassSelected);
DataFromPlate.Name = cGlobalInfo.CurrentScreening.GetName() + " - " + cGlobalInfo.CurrentScreening.ListPlatesActive.Count + " plates";
int MaxNumberOfPts = (int)cGlobalInfo.OptionsWindow.FFAllOptions.numericUpDownMinNumPointForFastDisp.Value;
if (ListWell.Count > MaxNumberOfPts)
{
cGlobalInfo.WindowHCSAnalyzer.richTextBoxConsole.AppendText("\n" + V1D.Title + ": Number of Wells is Higher than " + MaxNumberOfPts + " => Switching to FastPoints Mode.\n");
V1D.Chart.ISFastPoint = true;
}
V1D.SetInputData(DataFromPlate);
V1D.Run();
cDesignerSplitter DS = new cDesignerSplitter();
DS.Orientation = System.Windows.Forms.Orientation.Horizontal;
DS.SetInputData(V1D.GetOutPut());
cExtendedTable NewTable = ListWell.GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = "Histogram";
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Run();
DS.SetInputData(CV1.GetOutPut());
DS.Run();
cDisplayToWindow Disp0 = new cDisplayToWindow();
Disp0.SetInputData(DS.GetOutPut());
Disp0.Title = "Scatter points graph - " + DataFromPlate[0].Count + " wells.";
if (!Disp0.Run().IsSucceed) return;
Disp0.Display();
}
else if (ProcessModeplateByPlateToolStripMenuItem.Checked)
{
cDesignerTab CDT = new cDesignerTab();
foreach (cPlate TmpPlate in cGlobalInfo.CurrentScreening.ListPlatesActive)
{
cExtendedTable DataFromPlate = new cExtendedTable(TmpPlate.ListActiveWells,
cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx, ListClassSelected);
DataFromPlate.Name = TmpPlate.GetName();
V1D = new cViewerGraph1D();
V1D.Chart.IsSelectable = true;
V1D.Chart.LabelAxisX = "Well Index";
V1D.Chart.LabelAxisY = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
V1D.Chart.IsXGrid = true;
V1D.Chart.CurrentTitle.Tag = TmpPlate;
V1D.SetInputData(DataFromPlate);
V1D.Title = TmpPlate.GetName();
V1D.Run();
cDesignerSplitter DS = new cDesignerSplitter();
DS.Orientation = System.Windows.Forms.Orientation.Horizontal;
DS.SetInputData(V1D.GetOutPut());
cExtendedTable NewTable = TmpPlate.ListActiveWells.Filter(ListWellClassesSelected).GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = "Histogram";
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Run();
DS.Title = TmpPlate.GetName();
DS.SetInputData(CV1.GetOutPut());
DS.Run();
CDT.SetInputData(DS.GetOutPut());
}
CDT.Run();
cDisplayToWindow Disp0 = new cDisplayToWindow();
Disp0.SetInputData(CDT.GetOutPut());
Disp0.Title = "Scatter points graphs";
if (!Disp0.Run().IsSucceed) return;
Disp0.Display();
}
}
private void stackedHistogramsToolStripMenuItem_Click(object sender, EventArgs e)
{
cGUI_ListClasses GUI_ListClasses = new cGUI_ListClasses();
GUI_ListClasses.IsCheckBoxes = true;
GUI_ListClasses.IsSelectAll = true;
if (GUI_ListClasses.Run().IsSucceed == false) return;
cExtendedList ListClassSelected = GUI_ListClasses.GetOutPut()[0];
if (ListClassSelected.Sum() < 1)
{
MessageBox.Show("At least one classe has to be selected.", "Error !", MessageBoxButtons.OK, MessageBoxIcon.Error);
return;
}
cDisplayToWindow CDW1 = new cDisplayToWindow();
if ((ProcessModeCurrentPlateOnlyToolStripMenuItem.Checked) || (ProcessModeEntireScreeningToolStripMenuItem.Checked))
{
cListWells ListWellsToProcess = new cListWells(null);
List<cPlate> PlateList = new List<cPlate>();
if (ProcessModeCurrentPlateOnlyToolStripMenuItem.Checked)
PlateList.Add(cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate());
else
{
foreach (cPlate TmpPlate in cGlobalInfo.CurrentScreening.ListPlatesActive) PlateList.Add(TmpPlate);
}
foreach (cPlate TmpPlate in PlateList)
foreach (cWell item in TmpPlate.ListActiveWells)
if ((item.GetCurrentClassIdx() != -1) && (ListClassSelected[item.GetCurrentClassIdx()] == 1)) ListWellsToProcess.Add(item);
if (ProcessModeCurrentPlateOnlyToolStripMenuItem.Checked)
CDW1.Title = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - Stacked Histogram (" + PlateList[0].GetName() + ")";
else
CDW1.Title = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - Stacked Histogram - " + PlateList.Count + " plates";
cExtendedTable NewTable = ListWellsToProcess.GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = CDW1.Title;
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Run();
CDW1.SetInputData(CV1.GetOutPut());
}
else if (ProcessModeplateByPlateToolStripMenuItem.Checked)
{
cDesignerTab CDT = new cDesignerTab();
foreach (cPlate TmpPlate in cGlobalInfo.CurrentScreening.ListPlatesActive)
{
cListWells ListWellsToProcess = new cListWells(null);
foreach (cWell item in TmpPlate.ListActiveWells)
if ((item.GetCurrentClassIdx() != -1) && (ListClassSelected[item.GetCurrentClassIdx()] == 1)) ListWellsToProcess.Add(item);
cExtendedTable NewTable = ListWellsToProcess.GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - " + TmpPlate.GetName();
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Title = TmpPlate.GetName();
CV1.Run();
CDT.SetInputData(CV1.GetOutPut());
}
CDT.Run();
CDW1.SetInputData(CDT.GetOutPut());
CDW1.Title = "Stacked Histogram - " + cGlobalInfo.CurrentScreening.ListPlatesActive.Count + " plates";
}
CDW1.Run();
CDW1.Display();
}
private void PerformTestType(eTestType TestType)
{
#region extract classes of interest
cGUI_ListClasses GUI_ListClasses = new cGUI_ListClasses();
GUI_ListClasses.IsCheckBoxes = !_DescEvolCellByCellItem.Checked;
GUI_ListClasses.IsSelectAll = true;
if (GUI_ListClasses.Run().IsSucceed == false) return;
cExtendedTable ListClassSelected = GUI_ListClasses.GetOutPut();
if (ListClassSelected.Sum() < 1)
{
MessageBox.Show("At least one classe has to be selected.", "Error !", MessageBoxButtons.OK, MessageBoxIcon.Error);
return;
}
#endregion
cDesignerTab DT = new cDesignerTab();
for (int i = 0; i < cGlobalInfo.CurrentScreening.ListDescriptors.Count; i++)
{
if (cGlobalInfo.CurrentScreening.ListDescriptors[i].IsActive() == false) continue;
cDesignerSplitter DS = new cDesignerSplitter();
DS.Orientation = Orientation.Vertical;
cViewerTable VTable = new cViewerTable();
cViewertext VT = new cViewertext();
cExtendedTable FinalTable = new cExtendedTable(cGlobalInfo.ListWellClasses.Count, 0, 0);
for (int j = 0; j < cGlobalInfo.ListWellClasses.Count; j++)
{
FinalTable[j].Tag = cGlobalInfo.ListWellClasses[j];
FinalTable[j].Name = cGlobalInfo.ListWellClasses[j].Name;
}
cListWells ListWellsToProcess = new cListWells(null);
cDescriptorType CurrentDesc = cGlobalInfo.CurrentScreening.ListDescriptors[i];
// build the table
foreach (cPlate CurrentPlate in cGlobalInfo.CurrentScreening.ListPlatesActive)
{
foreach (cWell CurrentWell in CurrentPlate.ListActiveWells)
{
if ((CurrentWell.GetCurrentClassIdx() < 0) || (ListClassSelected[0][CurrentWell.GetCurrentClassIdx()] == 0)) continue;
{
FinalTable[CurrentWell.GetCurrentClassIdx()].Add(CurrentWell.GetAverageValue(CurrentDesc));
ListWellsToProcess.Add(CurrentWell);
}
}
}
cClean C = new cClean();
C.SetInputData(FinalTable);
C.Run();
cExtendedTable NewTable = C.GetOutPut();
cTwoSampleFTest TSFTest = null;
cANOVA Anova = null;
cTwoSampleUnpooledTTest TwoSampleTTest = null;
cStudent_tTest StudentTTest = null;
if (TestType == eTestType.F_TEST)
{
TSFTest = new cTwoSampleFTest();
TSFTest.SetInputData(NewTable);
TSFTest.Run();
VTable.SetInputData(TSFTest.GetOutPut());
VT.SetInputData(TSFTest.GetInfo());
}
else if (TestType == eTestType.ANOVA)
{
Anova = new cANOVA();
Anova.SetInputData(NewTable);
Anova.Run();
VTable.SetInputData(Anova.GetOutPut());
VT.SetInputData(Anova.GetInfo());
}
else if (TestType == eTestType.TWO_SAMPLES_T_TEST)
{
TwoSampleTTest = new cTwoSampleUnpooledTTest();
TwoSampleTTest.SetInputData(NewTable);
TwoSampleTTest.Run();
VTable.SetInputData(TwoSampleTTest.GetOutPut());
VT.SetInputData(TwoSampleTTest.GetInfo());
}
else if (TestType == eTestType.STUDENT_T_TEST)
{
StudentTTest = new cStudent_tTest();
StudentTTest.SetInputData(NewTable);
StudentTTest.Run();
VTable.SetInputData(StudentTTest.GetOutPut());
VT.SetInputData(StudentTTest.GetInfo());
}
VTable.DigitNumber = -1;
VTable.Run();
DS.SetInputData(VTable.GetOutPut());
VT.Run();
DS.SetInputData(VT.GetOutPut());
DS.Run();
DS.Title = cGlobalInfo.CurrentScreening.ListDescriptors[i].GetName();
cDesignerSplitter DSMain = new cDesignerSplitter();
DSMain.Orientation = Orientation.Horizontal;
DSMain.SetInputData(DS.GetOutPut());
// Compute and display associated Stacked histogram
//CDW1.Title = CompleteScreening.ListDescriptors[CompleteScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - Stacked Histogram - " + PlateList.Count + " plates";
cExtendedTable TableForHisto = ListWellsToProcess.GetAverageDescriptorValues(i);
TableForHisto.Name = "";
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(TableForHisto);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[i].GetName();
CV1.Chart.IsLegend = true;
CV1.Run();
DSMain.SetInputData(CV1.GetOutPut());
DSMain.Title = cGlobalInfo.CurrentScreening.ListDescriptors[i].GetName();
DSMain.Run();
DT.SetInputData(DSMain.GetOutPut());
}
DT.Run();
cDisplayToWindow DTW = new cDisplayToWindow();
DTW.SetInputData(DT.GetOutPut());
DTW.Title = "Classification Significance - " + TestType.ToString();
DTW.Run();
DTW.Display();
}
private void ToolStripMenuItem_DisplaySingleCellHistogram(object sender, EventArgs e)
{
cListWells ListWells = new cListWells();
List<cDescriptorType> LCDT = new List<cDescriptorType>();
LCDT.Add(cGlobalInfo.CurrentScreening.ListDescriptors.GetActiveDescriptor());
List<cWellClassType> ListForCurrentClass = new List<cWellClassType>();
ListForCurrentClass.Add(this);
cGUI_ListClasses GUIClasses = new cGUI_ListClasses();
GUIClasses.IsCheckBoxes = true;
GUIClasses.IsSelectAll = true;
GUIClasses.ClassType = eClassType.PHENOTYPE;
if (!GUIClasses.Run().IsSucceed) return;
cDesignerTab DT = new cDesignerTab();
if (cGlobalInfo.WindowHCSAnalyzer.ProcessModeEntireScreeningToolStripMenuItem.Checked)
{
foreach (cPlate CurrentPlate in cGlobalInfo.CurrentScreening.ListPlatesActive)
{
ListWells.AddRange(CurrentPlate.ListWells.Filter(ListForCurrentClass));
}
cExtendedTable FinalTable = new cExtendedTable();
FinalTable.Name = "Stacked Histogram: " + ListWells.Count + " wells";
int Idx = 0;
foreach (var item in cGlobalInfo.ListCellularPhenotypes)
{
FinalTable.Add(new cExtendedList());
FinalTable[Idx].Name = item.Name;
FinalTable[Idx].Tag = item;
Idx++;
}
foreach (cWell TmpWell in ListWells)
{
TmpWell.AssociatedPlate.DBConnection = new cDBConnection(TmpWell.AssociatedPlate, TmpWell.SQLTableName);
int IDx = 0;
foreach (var item in cGlobalInfo.ListCellularPhenotypes)
{
if (GUIClasses.GetOutPut()[0][IDx] == 0) { IDx++; continue; }
List<cCellularPhenotype> ListCellularPhenotypesToBeSelected = new List<cCellularPhenotype>();
ListCellularPhenotypesToBeSelected.Add(item);
cExtendedTable TmpET = TmpWell.AssociatedPlate.DBConnection.GetWellValues(TmpWell,
LCDT, ListCellularPhenotypesToBeSelected);
if (TmpET.Count > 0) FinalTable[IDx].AddRange(TmpET[0]);
IDx++;
}
TmpWell.AssociatedPlate.DBConnection.CloseConnection();
}
cViewerStackedHistogram VSH = new cViewerStackedHistogram();
VSH.SetInputData(FinalTable);
VSH.Chart.BinNumber = LCDT[0].GetBinNumber();
VSH.Chart.IsShadow = false;
VSH.Chart.IsBorder = false;
VSH.Chart.IsXGrid = true;
VSH.Chart.IsYGrid = true;
VSH.Chart.LabelAxisX = LCDT[0].GetName();
VSH.Run();
VSH.Chart.Width = 0;
VSH.Chart.Height = 0;
VSH.GetOutPut().Title = cGlobalInfo.CurrentScreening.GetName();
DT.SetInputData(VSH.GetOutPut());
}
else
{
cListPlates ListPlates = new cListPlates();
if (cGlobalInfo.WindowHCSAnalyzer.ProcessModeplateByPlateToolStripMenuItem.Checked)
ListPlates = cGlobalInfo.CurrentScreening.ListPlatesActive;
else
ListPlates.Add(cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate());
foreach (cPlate CurrentPlate in ListPlates)
{
ListWells = CurrentPlate.ListWells.Filter(ListForCurrentClass);
cExtendedTable FinalTable = new cExtendedTable();
FinalTable.Name = "Stacked Histogram: " + ListWells.Count + " wells - " + CurrentPlate.GetName();
int Idx = 0;
foreach (var item in cGlobalInfo.ListCellularPhenotypes)
{
FinalTable.Add(new cExtendedList());
FinalTable[Idx].Name = item.Name;
FinalTable[Idx].Tag = item;
if (GUIClasses.GetOutPut()[0][Idx] == 0)
{
Idx++;
continue;
}
Idx++;
}
foreach (cWell TmpWell in ListWells)
{
TmpWell.AssociatedPlate.DBConnection = new cDBConnection(TmpWell.AssociatedPlate, TmpWell.SQLTableName);
int IDx = 0;
foreach (var item in cGlobalInfo.ListCellularPhenotypes)
{
if (GUIClasses.GetOutPut()[0][IDx] == 0) { IDx++; continue; }
List<cCellularPhenotype> ListCellularPhenotypesToBeSelected = new List<cCellularPhenotype>();
ListCellularPhenotypesToBeSelected.Add(item);
cExtendedTable TmpET = TmpWell.AssociatedPlate.DBConnection.GetWellValues(TmpWell,
LCDT, ListCellularPhenotypesToBeSelected);
if (TmpET.Count > 0) FinalTable[IDx].AddRange(TmpET[0]);
IDx++;
}
TmpWell.AssociatedPlate.DBConnection.CloseConnection();
}
cViewerStackedHistogram VSH = new cViewerStackedHistogram();
VSH.SetInputData(FinalTable);
VSH.Chart.BinNumber = LCDT[0].GetBinNumber();
VSH.Chart.IsShadow = false;
VSH.Chart.IsBorder = false;
VSH.Chart.IsXGrid = true;
VSH.Chart.IsYGrid = true;
VSH.Chart.LabelAxisX = LCDT[0].GetName();
VSH.Run();
VSH.Chart.Width = 0;
VSH.Chart.Height = 0;
VSH.GetOutPut().Title = CurrentPlate.GetName();
DT.SetInputData(VSH.GetOutPut());
}
}
DT.Run();
cDisplayToWindow DTW = new cDisplayToWindow();
DTW.SetInputData(DT.GetOutPut());
DTW.Title = "Single Cell Histograms";
DTW.Run();
DTW.Display();
}
private void ToolStripMenuItem_DisplayHistograms(object sender, EventArgs e)
{
cDesignerTab DT = new cDesignerTab();
cListExtendedTable ListTables = new cListExtendedTable(this.AssociatedImage);
for (int i = 0; i < ListTables.Count; i++)
{
cLinearize LI = new cLinearize();
LI.SetInputData(ListTables[i]);
LI.Run();
cViewerStackedHistogram VH = new cViewerStackedHistogram();
VH.SetInputData(LI.GetOutPut());
VH.Title = ListTables[i].Name;
if (!VH.Run().IsSucceed) return;
DT.SetInputData(VH.GetOutPut());
}
DT.Run();
cDisplayToWindow MyDisplay = new cDisplayToWindow();
MyDisplay.SetInputData(DT.GetOutPut());
MyDisplay.Title = "Histograms(" + this.AssociatedImage.Name + ")";
MyDisplay.Run();
MyDisplay.Display();
}
private void ToolStripMenuItem_DisplayAsStackedHistograms(object sender, EventArgs e)
{
cDisplayToWindow CDW1 = new cDisplayToWindow();
cListWells ListWellsToProcess = new cListWells(null);
List<cPlate> PlateList = new List<cPlate>();
PlateList.Add(this);
foreach (cPlate TmpPlate in PlateList)
foreach (cWell item in TmpPlate.ListActiveWells)
if (item.GetCurrentClassIdx() != -1) ListWellsToProcess.Add(item);
CDW1.Title = this.ParentScreening.ListDescriptors[this.ParentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - Stacked Histogram (" + PlateList[0].Name + ")";
cExtendedTable NewTable = ListWellsToProcess.GetAverageDescriptorValues(this.ParentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = CDW1.Title;
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = this.ParentScreening.ListDescriptors[this.ParentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Run();
CDW1.SetInputData(CV1.GetOutPut());
CDW1.Run();
CDW1.Display();
}
private void ToolStripMenuItem_DisplayHistograms(object sender, EventArgs e)
{
if (GlobalInfo == null) return;
for (int i = 0; i < cGlobalInfo.ListWellClasses.Count; i++)
{
if (cGlobalInfo.ListWellClasses[i].Name == this.Name)
{
Idx = i;
break;
}
}
if (Idx == -1) return;
if ((cGlobalInfo.CurrentScreening.ListDescriptors == null) || (cGlobalInfo.CurrentScreening.ListDescriptors.Count == 0)) return;
cDisplayToWindow CDW1 = new cDisplayToWindow();
cListWells ListWellsToProcess = new cListWells(null);
List<cPlate> PlateList = new List<cPlate>();
cDesignerSplitter DS = new cDesignerSplitter();
foreach (cPlate TmpPlate in cGlobalInfo.CurrentScreening.ListPlatesActive) PlateList.Add(TmpPlate);
foreach (cPlate TmpPlate in PlateList)
foreach (cWell item in TmpPlate.ListActiveWells)
if (item.GetCurrentClassIdx() == base.Idx) ListWellsToProcess.Add(item);
cExtendedTable NewTable2 = ListWellsToProcess.GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable2.Name = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - Histogram - " + PlateList.Count + " plates";
cViewerStackedHistogram CV2 = new cViewerStackedHistogram();
CV2.SetInputData(NewTable2);
CV2.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV2.Chart.IsBorder = false;
CV2.Chart.Width = 0;
CV2.Chart.Height = 0;
//StripLine AverageLine = new StripLine();
//AverageLine.BackColor = Color.Red;
//AverageLine.IntervalOffset = GlobalInfo.CurrentScreen.ListDescriptors[Parent.ListDescriptors.CurrentSelectedDescriptor].GetValue();
//AverageLine.StripWidth = 0.0001;
//AverageLine.Text = this.ListDescriptors[Parent.ListDescriptors.CurrentSelectedDescriptor].GetValue().ToString("N2");
CV2.Run();
//CV2.Chart.ChartAreas[0].AxisX.StripLines.Add(AverageLine);
DS.SetInputData(CV2.GetOutPut());
PlateList.Clear();
PlateList.Add(cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate());
ListWellsToProcess.Clear();
foreach (cPlate TmpPlate in PlateList)
foreach (cWell item in TmpPlate.ListActiveWells)
if (item.GetCurrentClassIdx() == Idx) ListWellsToProcess.Add(item);
CDW1.Title = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - Histogram (" + PlateList[0].GetName() + ")";
cExtendedTable NewTable = ListWellsToProcess.GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = CDW1.Title;
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Chart.Width = 0;
CV1.Chart.Height = 0;
// CV1.Chart.ChartAreas[0].AxisX.Minimum = CV2.Chart.ChartAreas[0].AxisX.Minimum;
// CV1.Chart.ChartAreas[0].AxisX.Maximum = CV2.Chart.ChartAreas[0].AxisX.Maximum;
CV1.Run();
// CV1.Chart.ChartAreas[0].AxisX.StripLines.Add(AverageLine);
DS.SetInputData(CV1.GetOutPut());
DS.Run();
CDW1.SetInputData(DS.GetOutPut());
CDW1.Run();
CDW1.Display();
return;
}
public void Refresh1DScatter()
{
List<cWellClassType> ListWellClassesSelected = cGlobalInfo.ListWellClasses;
cViewerGraph1D V1D = new cViewerGraph1D();
V1D.Chart.IsSelectable = true;
V1D.Chart.LabelAxisX = "Well Index";
V1D.Chart.LabelAxisY = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
V1D.Chart.IsDetachable = false;
V1D.Chart.IsXGrid = true;
cExtendedList EtF = new cExtendedList();
for (int i = 0; i < cGlobalInfo.ListWellClasses.Count; i++)
{
EtF.Add(1);
}
cExtendedTable DataFromPlate = new cExtendedTable(cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate().ListActiveWells,
cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx, EtF);
DataFromPlate.Name = cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate().GetName();
V1D.Chart.IsShadow = true;
V1D.Chart.IsBorder = true;
//V1D.Chart.IsSelectable = true;
V1D.Chart.CurrentTitle.Tag = cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate();
V1D.SetInputData(DataFromPlate);
V1D.Run();
cDesignerSplitter DS = new cDesignerSplitter();
DS.Orientation = System.Windows.Forms.Orientation.Horizontal;
DS.SetInputData(V1D.GetOutPut());
cExtendedTable NewTable = cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate().ListActiveWells.Filter(ListWellClassesSelected).GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = "Histogram";
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Run();
CV1.Chart.IsDetachable = false;
DS.SetInputData(CV1.GetOutPut());
DS.Run();
cGlobalInfo.WindowHCSAnalyzer.tabPage1DView.Controls.Clear();
DS.GetOutPut().Width = cGlobalInfo.WindowHCSAnalyzer.tabPage1DView.Width;
DS.GetOutPut().Height = cGlobalInfo.WindowHCSAnalyzer.tabPage1DView.Height;
DS.GetOutPut().Controls[0].Width = cGlobalInfo.WindowHCSAnalyzer.tabPage1DView.Width;
DS.GetOutPut().Controls[0].Height = cGlobalInfo.WindowHCSAnalyzer.tabPage1DView.Height;
cGlobalInfo.WindowHCSAnalyzer.tabPage1DView.Controls.Add(DS.GetOutPut());
}
public void DisplayInfoWindow(int IdxDescriptor)
{
FormForWellInformation NewWindow = new FormForWellInformation(this);
NewWindow.Text = this.GetShortInfo();
cExtendedTable EL = this.GetAverageValuesList(true);
cViewerTable VT = new cViewerTable();
VT.SetInputData(EL);
VT.Run();
cExtendedControl EXT = VT.GetOutPut();
EXT.Width = NewWindow.panelForDescValues.Width;
EXT.Height = NewWindow.panelForDescValues.Height;
NewWindow.panelForDescValues.Controls.Add(VT.GetOutPut());
NewWindow.textBoxName.Text = GetCpdName();
NewWindow.textBoxInfo.Text = Info;
object ConcentrationValue = this.ListProperties.FindValueByName("Concentration");
if (ConcentrationValue != null) NewWindow.textBoxConcentration.Text = ((double)ConcentrationValue).ToString("e4");
else
NewWindow.textBoxConcentration.Text = "n.a.";
object ValObj = this.ListProperties.FindValueByName("Locus ID");
if (ValObj != null)
{
int LocusID = (int)ValObj;
NewWindow.textBoxLocusID.Text = ((int)(LocusID)).ToString();
}
else
NewWindow.textBoxLocusID.Text = "n.a.";
if (cGlobalInfo.ViewMode != eViewMode.PIE)
{
if (/*(cGlobalInfo.ViewMode == eViewMode.DISTRIBUTION) &&*/ (cGlobalInfo.CurrentScreening.ListDescriptors.GetActiveDescriptor().IsConnectedToDatabase))
{
this.AssociatedPlate.DBConnection = new cDBConnection(this.AssociatedPlate, this.SQLTableName);
List<cDescriptorType> LCDT = new List<cDescriptorType>();
LCDT.Add(cGlobalInfo.CurrentScreening.ListDescriptors.GetActiveDescriptor());
cExtendedTable ET = new cExtendedTable();
foreach (var item in cGlobalInfo.ListCellularPhenotypes)
{
List<cCellularPhenotype> ListCellularPhenotypesToBeSelected = new List<cCellularPhenotype>();
ListCellularPhenotypesToBeSelected.Add(item);
cExtendedTable TmpET = this.AssociatedPlate.DBConnection.GetWellValues(this,
LCDT,
ListCellularPhenotypesToBeSelected);
if (TmpET.Count == 0) continue;
TmpET[0].Name = item.Name;
TmpET[0].Tag = item;
ET.Add(TmpET[0]);
}
ET.Name = this.GetShortInfo();
cViewerStackedHistogram VSH = new cViewerStackedHistogram();
VSH.SetInputData(ET);
// VSH.Chart.BinNumber = LCDT[0].GetBinNumber();
VSH.ListProperties.FindByName("Bin Number").SetNewValue((int)LCDT[0].GetBinNumber());
//VS.Chart.IsSelectable = true;
//VSH.Chart.BackgroundColor = Color.LightGray;
VSH.Chart.IsShadow = true;
VSH.Chart.IsXGrid = true;
VSH.Chart.IsYGrid = true;
VSH.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
VSH.Run();
VSH.Chart.Width = 0;
VSH.Chart.Height = 0;
cExtendedControl EC = VSH.GetOutPut();
EC.Width = NewWindow.chartForFormWell.Width;
EC.Height = NewWindow.chartForFormWell.Height;
NewWindow.chartForFormWell.Controls.Add(EC);
this.AssociatedPlate.DBConnection.CloseConnection();
}
else
{
NewWindow.tabControlMain.TabPages.RemoveByKey("tabPageHisto");
}
}
else
{
NewWindow.tabControlMain.TabPages["tabPageHisto"].Text = "Pie";
Series CurrentSeries = new Series("ChartSeries" + PosX + "x" + PosY);
ChartArea CurrentChartArea = new ChartArea("ChartArea" + PosX + "x" + PosY);
CurrentSeries.ChartType = SeriesChartType.Pie;
for (int IdxValue = 0; IdxValue < ListSignatures.Count; IdxValue++)
{
if (ListSignatures[IdxValue].GetAssociatedType().IsActive())
{
double Value = ListSignatures[IdxValue].GetValue();
CurrentSeries.Points.Add(Value);
if (Value > 0)
{
CurrentSeries.Points[CurrentSeries.Points.Count - 1].Label = ListSignatures[IdxValue].GetAssociatedType().GetName();
CurrentSeries.Points[CurrentSeries.Points.Count - 1].ToolTip = Value.ToString();
}
}
}
CurrentChartArea.BorderColor = Color.Black;
NewWindow.chartForFormWell.ChartAreas.Add(CurrentChartArea);
NewWindow.chartForFormWell.TextAntiAliasingQuality = TextAntiAliasingQuality.High;
CurrentChartArea.BackColor = Color.FromArgb(64, 64, 64);
CurrentSeries.ChartArea = "ChartArea" + PosX + "x" + PosY;
CurrentSeries.Name = "Series" + PosX + "x" + PosY;
NewWindow.chartForFormWell.Series.Add(CurrentSeries);
}
#region Text Info
NewWindow.richTextBoxDescription.AcceptsTab = true;
NewWindow.richTextBoxDescription.AppendText("Plate: " + this.AssociatedPlate.GetName() + "\nWell: [" + this.GetPosX() + "x" + this.GetPosY() + "] - " + this.GetNumBiologicalObjects() + " Object(s).");
NewWindow.richTextBoxDescription.AppendText("\n\nProperty List:\n");
foreach (var item in this.ListProperties)
{
if (item.GetValue() != null)
{
NewWindow.richTextBoxDescription.AppendText("\nName:\t" + item.PropertyType.Name + "\n\tType: " + item.PropertyType.Type.ToString() + "\n\tValue: " + item.GetValue().ToString() + "\n\tLocked: " + item.PropertyType.IsLocked.ToString() + "\n");
if ((item.PropertyType.Type == eDataType.DOUBLE) || (item.PropertyType.Type == eDataType.INTEGER))
{
NewWindow.richTextBoxDescription.AppendText("\tMin:\t" + item.PropertyType.Min + "\n\tMax: " + item.PropertyType.Max + "\n");
}
}
else
NewWindow.richTextBoxDescription.AppendText("\nName:\t" + item.PropertyType.Name + "\n\tType: " + item.PropertyType.Type.ToString() + "\n\tValue: NULL\n\tLocked: " + item.PropertyType.IsLocked.ToString() + "\n");
}
#endregion
NewWindow.chartForFormWell.Update();
NewWindow.Show();
return;
}
//private void ToolStripMenuItem_DisplayImage(object sender, EventArgs e)
//{
// vtkImageData ID0 = null;
// string[] ListChar = this.Info.Split('.');
// if (ListChar[ListChar.Length - 1].ToLower() == "jpg")
// {
// vtkJPEGReader JPEGReader = vtkJPEGReader.New();
// JPEGReader.SetFileName(this.Info);
// JPEGReader.Update();
// ID0 = JPEGReader.GetOutput();
// }
// if ((ListChar[ListChar.Length - 1].ToLower() == "tif") || (ListChar[ListChar.Length - 1].ToLower() == "tiff"))
// {
// vtkTIFFReader TIFFReader = vtkTIFFReader.New();
// TIFFReader.SetFileName(this.Info);
// TIFFReader.Update();
// ID0 = TIFFReader.GetOutput();
// }
// vtkImageReader Reader = vtkImageReader.New();
// Reader.SetFileName(this.Info);
// Reader.Update();
// if (Reader == null) return;
// //vtkJPEGReader TIFFReader = vtkJPEGReader.New();
// //TIFFReader.SetFileName(this.Info);
// //TIFFReader.Update();
// // cVolume3D Volume3D0 = new cVolume3D(ID0, new HCSAnalyzer.Classes._3D.cPoint3D(0, 0, 0));
// cViewerImage3D VI3D = new cViewerImage3D();
// VI3D.SetInputData(ID0);
// VI3D.Run();
// cDisplayToWindow DTW = new cDisplayToWindow();
// DTW.SetInputData(VI3D.GetOutPut());
// DTW.Title = this.Info;
// DTW.Run();
// DTW.Title = this.Info;
// DTW.Display();
//}
private void DisplayHisto(object sender, EventArgs e)
{
if ((cGlobalInfo.CurrentScreening.ListDescriptors == null) || (cGlobalInfo.CurrentScreening.ListDescriptors.Count == 0)) return;
cDisplayToWindow CDW1 = new cDisplayToWindow();
cListWells ListWellsToProcess = new cListWells(null);
List<cPlate> PlateList = new List<cPlate>();
cDesignerSplitter DS = new cDesignerSplitter();
foreach (cPlate TmpPlate in cGlobalInfo.CurrentScreening.ListPlatesActive) PlateList.Add(TmpPlate);
foreach (cPlate TmpPlate in PlateList)
foreach (cWell item in TmpPlate.ListActiveWells)
if (item.GetCurrentClassIdx() != -1) ListWellsToProcess.Add(item);
cExtendedTable NewTable2 = ListWellsToProcess.GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable2.Name = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - Stacked Histogram - " + PlateList.Count + " plates";
cViewerStackedHistogram CV2 = new cViewerStackedHistogram();
CV2.SetInputData(NewTable2);
CV2.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV2.Chart.IsBorder = false;
CV2.Chart.Width = 0;
CV2.Chart.Height = 0;
StripLine AverageLine = new StripLine();
AverageLine.BackColor = Color.Red;
AverageLine.IntervalOffset = this.ListSignatures[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetValue();
AverageLine.StripWidth = 0.0001;
AverageLine.Text = this.ListSignatures[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetValue().ToString("N2");
CV2.Run();
CV2.Chart.ChartAreas[0].AxisX.StripLines.Add(AverageLine);
DS.SetInputData(CV2.GetOutPut());
PlateList.Clear();
PlateList.Add(cGlobalInfo.CurrentScreening.GetCurrentDisplayPlate());
ListWellsToProcess.Clear();
foreach (cPlate TmpPlate in PlateList)
foreach (cWell item in TmpPlate.ListActiveWells)
if (item.GetCurrentClassIdx() != -1) ListWellsToProcess.Add(item);
CDW1.Title = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName() + " - Stacked Histogram (" + PlateList[0].GetName() + ")";
cExtendedTable NewTable = ListWellsToProcess.GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
NewTable.Name = CDW1.Title;
cViewerStackedHistogram CV1 = new cViewerStackedHistogram();
CV1.SetInputData(NewTable);
CV1.Chart.LabelAxisX = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
CV1.Chart.Width = 0;
CV1.Chart.Height = 0;
// CV1.Chart.ChartAreas[0].AxisX.Minimum = CV2.Chart.ChartAreas[0].AxisX.Minimum;
// CV1.Chart.ChartAreas[0].AxisX.Maximum = CV2.Chart.ChartAreas[0].AxisX.Maximum;
CV1.Run();
CV1.Chart.ChartAreas[0].AxisX.StripLines.Add(AverageLine);
DS.SetInputData(CV1.GetOutPut());
DS.Run();
CDW1.SetInputData(DS.GetOutPut());
CDW1.Run();
CDW1.Display();
return;
//cExtendedList Pos = new cExtendedList();
//cWell TempWell;
//int NumberOfPlates = cGlobalInfo.PlateListWindow.listBoxPlateNameToProcess.Items.Count;
//// loop on all the plate
//for (int PlateIdx = 0; PlateIdx < NumberOfPlates; PlateIdx++)
//{
// cPlate CurrentPlateToProcess = cGlobalInfo.CurrentScreening.ListPlatesActive.GetPlate((string)cGlobalInfo.PlateListWindow.listBoxPlateNameToProcess.Items[PlateIdx]);
// for (int row = 0; row < cGlobalInfo.CurrentScreening.Rows; row++)
// for (int col = 0; col < cGlobalInfo.CurrentScreening.Columns; col++)
// {
// TempWell = CurrentPlateToProcess.GetWell(col, row, false);
// if (TempWell == null) continue;
// else
// {
// if (TempWell.GetClassIdx() == this.ClassForClassif)
// Pos.Add(TempWell.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptor].GetValue());
// }
// }
//}
//if (Pos.Count == 0)
//{
// MessageBox.Show("No well of class " + cGlobalInfo.CurrentScreening.SelectedClass + " selected !", "Error", MessageBoxButtons.OK, MessageBoxIcon.Error);
// return;
//}
//List<double[]> HistoPos = Pos.CreateHistogram((int)cGlobalInfo.OptionsWindow.numericUpDownHistoBin.Value);
//if (HistoPos == null) return;
//cWindowToDisplayHisto NewWindow = new cWindowToDisplayHisto(this.Parent, Pos);
//Series SeriesPos = new Series();
//SeriesPos.ShadowOffset = 1;
//if (HistoPos.Count == 0) return;
//for (int IdxValue = 0; IdxValue < HistoPos[0].Length; IdxValue++)
//{
// SeriesPos.Points.AddXY(HistoPos[0][IdxValue], HistoPos[1][IdxValue]);
// SeriesPos.Points[IdxValue].ToolTip = HistoPos[1][IdxValue].ToString();
// if (this.ClassForClassif == -1)
// SeriesPos.Points[IdxValue].Color = Color.Black;
// else
// SeriesPos.Points[IdxValue].Color = cGlobalInfo.ListWellClasses[this.ClassForClassif].ColourForDisplay;
//}
//ChartArea CurrentChartArea = new ChartArea();
//CurrentChartArea.BorderColor = Color.Black;
//NewWindow.chartForSimpleForm.ChartAreas.Add(CurrentChartArea);
//CurrentChartArea.Axes[0].MajorGrid.Enabled = false;
//CurrentChartArea.Axes[0].Title = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptor].GetName();
//CurrentChartArea.Axes[1].Title = "Sum";
//CurrentChartArea.AxisX.LabelStyle.Format = "N2";
//NewWindow.chartForSimpleForm.TextAntiAliasingQuality = TextAntiAliasingQuality.High;
//CurrentChartArea.BackGradientStyle = GradientStyle.TopBottom;
//CurrentChartArea.BackColor = cGlobalInfo.OptionsWindow.panel1.BackColor;
//CurrentChartArea.BackSecondaryColor = Color.White;
//SeriesPos.ChartType = SeriesChartType.Column;
//// SeriesPos.Color = cGlobalInfo.CurrentScreening.GetColor(1);
//NewWindow.chartForSimpleForm.Series.Add(SeriesPos);
//NewWindow.chartForSimpleForm.ChartAreas[0].CursorX.IsUserEnabled = true;
//NewWindow.chartForSimpleForm.ChartAreas[0].CursorX.IsUserSelectionEnabled = true;
//NewWindow.chartForSimpleForm.ChartAreas[0].AxisX.ScaleView.Zoomable = true;
//NewWindow.chartForSimpleForm.ChartAreas[0].AxisX.ScrollBar.IsPositionedInside = true;
//StripLine AverageLine = new StripLine();
//AverageLine.BackColor = Color.Red;
//AverageLine.IntervalOffset = this.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptor].GetValue();
//AverageLine.StripWidth = 0.0001;
//AverageLine.Text = String.Format("{0:0.###}", this.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptor].GetValue());
//CurrentChartArea.AxisX.StripLines.Add(AverageLine);
//if (cGlobalInfo.OptionsWindow.checkBoxDisplayHistoStats.Checked)
//{
// StripLine NAverageLine = new StripLine();
// NAverageLine.BackColor = Color.Black;
// NAverageLine.IntervalOffset = Pos.Mean();
// NAverageLine.StripWidth = 0.0001;// double.Epsilon;
// CurrentChartArea.AxisX.StripLines.Add(NAverageLine);
// NAverageLine.Text = String.Format("{0:0.###}", NAverageLine.IntervalOffset);
// StripLine StdLine = new StripLine();
// StdLine.BackColor = Color.FromArgb(64, Color.Black);
// double Std = Pos.Std();
// StdLine.IntervalOffset = NAverageLine.IntervalOffset - 0.5 * Std;
// StdLine.StripWidth = Std;
// CurrentChartArea.AxisX.StripLines.Add(StdLine);
// //NAverageLine.StripWidth = 0.01;
//}
//Title CurrentTitle = new Title(this.StateForClassif + " - " + cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptor].GetName() + " histogram.");
//CurrentTitle.Font = new System.Drawing.Font("Arial", 11, FontStyle.Bold);
//NewWindow.chartForSimpleForm.Titles.Add(CurrentTitle);
//NewWindow.Text = CurrentTitle.Text;
//NewWindow.Show();
//NewWindow.chartForSimpleForm.Update();
//NewWindow.chartForSimpleForm.Show();
//NewWindow.Controls.AddRange(new System.Windows.Forms.Control[] { NewWindow.chartForSimpleForm });
//return;
}
private void RedrawHistoHorizontal(bool KeepBinning)
{
cExtendedTable FinalTable = new cExtendedTable();
int Idx = 0;
foreach (var item in cGlobalInfo.ListCellularPhenotypes)
{
FinalTable.Add(new cExtendedList());
FinalTable[Idx].Name = item.Name;
FinalTable[Idx].Tag = item;
Idx++;
}
int IdxPt = 0;
for (int j = 0; j < this.chartForPoints.Series[0].Points.Count; j++)
{
cSingleBiologicalObject TmpObj = (cSingleBiologicalObject)this.chartForPoints.Series[0].Points[j].Tag;
if (this.ListPhenotypeVisible[(int)MachineLearning.Classes[j]])
{
FinalTable[(int)MachineLearning.Classes[j]/*TmpObj.GetAssociatedPhenotype().Idx*/].Add(this.chartForPoints.Series[0].Points[j].XValue);
IdxPt++;
}
}
FinalTable.Name = "Stacked Histogram: " + IdxPt + " points";
int CurrentNumberOfBin = 100;
if (KeepBinning && (VSH != null))
{
CurrentNumberOfBin = VSH.Chart.BinNumber;// (int)VSH.ListProperties.FindByName("Bin Number").GetValue();
}
VSH = new cViewerStackedHistogram();
VSH.SetInputData(FinalTable);//new cExtendedTable(ListValue));
VSH.Chart.LabelAxisY = "";
VSH.Chart.IsBorder = false;
VSH.Chart.IsShadow = false;
VSH.Chart.BackgroundColor = Color.White;
VSH.Chart.DefaultAxisXMin = new cExtendedList(this.chartForPoints.ChartAreas[0].AxisX.Minimum);
VSH.Chart.DefaultAxisXMax = new cExtendedList(this.chartForPoints.ChartAreas[0].AxisX.Maximum);
if (KeepBinning)
{
VSH.ListProperties.FindByName("Bin Number").SetNewValue(CurrentNumberOfBin);
}
VSH.Run();
splitContainerVertical.Panel2.Controls.Clear();
cExtendedControl TextEC = VSH.GetOutPut();
VSH.Chart.Width = 0;// splitContainerVertical.Panel2.Width - 23;
VSH.Chart.Height = 0;// splitContainerVertical.Panel2.Height;
TextEC.Width = splitContainerVertical.Panel2.Width - 23;
TextEC.Height = splitContainerVertical.Panel2.Height;
TextEC.Location = new Point(23, 0);
VSH.Chart.Anchor = (System.Windows.Forms.AnchorStyles)(System.Windows.Forms.AnchorStyles.Top | System.Windows.Forms.AnchorStyles.Bottom
| System.Windows.Forms.AnchorStyles.Left
| System.Windows.Forms.AnchorStyles.Right);
TextEC.Anchor = (System.Windows.Forms.AnchorStyles)(System.Windows.Forms.AnchorStyles.Top | System.Windows.Forms.AnchorStyles.Bottom
| System.Windows.Forms.AnchorStyles.Left
| System.Windows.Forms.AnchorStyles.Right);
//VSH.Chart.Width = splitContainerVertical.Panel2.Width - 23;
//VSH.Chart.Height = splitContainerVertical.Panel2.Height;
splitContainerVertical.Panel2.Controls.Add(TextEC);
return;
//cPanelHisto PanelHisto = new cPanelHisto(ListValue, eGraphType.HISTOGRAM, eOrientation.HORIZONTAL);
//PanelHisto.WindowForPanelHisto.UserEnable = false;
//PanelHisto.WindowForPanelHisto.panelForGraphContainer.Size = new System.Drawing.Size(splitContainerVertical.Panel2.Width - 23, splitContainerVertical.Panel2.Height);
//PanelHisto.WindowForPanelHisto.panelForGraphContainer.BackColor = Color.White;
//PanelHisto.WindowForPanelHisto.panelForGraphContainer.Location = new Point(23, 0);
//PanelHisto.WindowForPanelHisto.panelForGraphContainer.Anchor = AnchorStyles.Bottom | AnchorStyles.Top | AnchorStyles.Left | AnchorStyles.Right;
//PanelHisto.WindowForPanelHisto.panelForGraphContainer.BorderStyle = BorderStyle.None;
//PanelHisto.WindowForPanelHisto.CurrentChartArea.AxisX.Minimum = chartForPoints.ChartAreas[0].AxisX.Minimum;
//PanelHisto.WindowForPanelHisto.CurrentChartArea.AxisX.Maximum = chartForPoints.ChartAreas[0].AxisX.Maximum;
//splitContainerVertical.Panel2.Controls.Clear();
//splitContainerVertical.Panel2.Controls.Add(PanelHisto.WindowForPanelHisto.panelForGraphContainer);
}
void Process()
{
cExtendedTable NewTable1 = null;
string DescName = "";
if (this.InputWells != null)
{
NewTable1 = new cExtendedTable(this.InputWells, cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
DescName = cGlobalInfo.CurrentScreening.ListDescriptors[cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx].GetName();
}
else if (this.InputTable != null)
{
NewTable1 = this.InputTable;
}
cDesignerTab NormalityTestTabs = new cDesignerTab();
cNormalityAndersonDarling NAD = new cNormalityAndersonDarling();
NAD.SetInputData(NewTable1);
NAD.Run();
cExtendedTable TNAD = NAD.GetOutPut();
TNAD[0].Name = "Anderson-Darling Test";
cViewerTable VTNAD = new cViewerTable();
VTNAD.SetInputData(TNAD);
VTNAD.Sender = NAD;
VTNAD.IsDisplayInfo = true;
VTNAD.DigitNumber = -1;
VTNAD.Run();
cExtendedControl AndersonCtrl = VTNAD.GetOutPut();
AndersonCtrl.Title = TNAD[0].Name;
cNormalityJarqueBera NJB = new cNormalityJarqueBera();
NJB.SetInputData(NewTable1);
NJB.Run();
cExtendedTable TmpTest = NJB.GetOutPut();
TmpTest[0].Name = "Jarque-Bera Test";
cViewerTable VT = new cViewerTable();
VT.SetInputData(TmpTest);
VT.Sender = NJB;
VT.IsDisplayInfo = true;
VT.DigitNumber = -1;
VT.Run();
cExtendedControl JarqueCtrl = VT.GetOutPut();
JarqueCtrl.Title = TmpTest[0].Name;
NormalityTestTabs.SetInputData(JarqueCtrl);
NormalityTestTabs.SetInputData(AndersonCtrl);
NormalityTestTabs.Run();
//cExtendedControl ControlForTab = CADP.GetOutPut();
//NormalityTestTabs.Title = TmpPlate.Name;
cDesignerSplitter MainDS = new cDesignerSplitter();
MainDS.Orientation = Orientation.Vertical;
cDesignerSplitter DS = new cDesignerSplitter();
DS.Orientation = Orientation.Horizontal;
cNormalProbabilityPlot NPP = new cNormalProbabilityPlot();
NPP.SetInputData(NewTable1);
NPP.IdxColumnToProcess = 0;
NPP.Run();
cViewer2DScatterPoint V2DS = new cViewer2DScatterPoint();
cExtendedTable TableToDisp = NPP.GetOutPut();
TableToDisp.Name = "";
V2DS.Chart.IsSelectable = true;
V2DS.Chart.IsBorder = false;
V2DS.Chart.IsShadow = false;
V2DS.Chart.IsXGrid = true;
V2DS.Chart.IsYGrid = true;
V2DS.Chart.IsDisplayTrendLine = true;
V2DS.SetInputData(TableToDisp);
V2DS.Run();
V2DS.Chart.CurrentTitle.Text = "Normal Probability Plot\n" + DescName + " - " + NewTable1[0].Count + " points";
DS.SetInputData(V2DS.GetOutPut());
cViewerStackedHistogram VSH = new cViewerStackedHistogram();
cExtendedTable NewTable = null;
if (this.InputWells != null)
{
NewTable = this.InputWells.GetAverageDescriptorValues(cGlobalInfo.CurrentScreening.ListDescriptors.CurrentSelectedDescriptorIdx);
}
else
{
NewTable = this.InputTable;
}
NewTable.Name = DescName + " - Stacked Histogram - " + NewTable1[0].Count + " values";
VSH.SetInputData(NewTable);
VSH.Chart.LabelAxisX = DescName;
VSH.Run();
DS.SetInputData(VSH.GetOutPut());
DS.Run();
cExtendedControl TextEC = NormalityTestTabs.GetOutPut();
TextEC.Width = 0;
TextEC.Height = 0;
TextEC.Anchor = (System.Windows.Forms.AnchorStyles)(System.Windows.Forms.AnchorStyles.Top | System.Windows.Forms.AnchorStyles.Bottom
| System.Windows.Forms.AnchorStyles.Left
| System.Windows.Forms.AnchorStyles.Right);
MainDS.SetInputData(TextEC);
MainDS.SetInputData(DS.GetOutPut());
MainDS.Run();
this.Output = MainDS.GetOutPut();
}
